Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00604 ATGACTCTCCGACTCATCACATCTCCGCCCATCTTCCCTCGCTTCACCTGTCACGCCACCGCCCTTCCTCCTTCTCCTCAAATCTCCACACCAACTTCTATTTCTTCAACTCCACAGCCACCTTCACTAACATGCGCACTTCACTGTTCCCATTTTCAATCGTGTTCCGGGTGTACGCATGAGCATAACCTCCATCATCCTGTAATATTGGATGATGCTATGAATTTCTTTCGGAGATTTGGTGTTACTGACTTCACATTTGATTCTTGCAATTTGTGGGGTTGGAGGTGTCGTGCGAAATTGGCAGTGCGTGGCTCTTCAGCCAACCCTCTCATTGGCCTTTATGAGGAGGGAACTCATAACGTAGTTGACATTCCAGAGTGCAAAGCTCATCATCCTAATATTAATGCTGCCGTGGAGCTTCTTAGACaagGTATTACTGAATTAGATGTTGAACCATTTCTTGAAGATGAAGGCACCGGCTATTTGCGATATGTTCAGATGGCTGTGACAACACACAACACCTCTCTTCCTGCTGCACAAAGATATATGAGTGGTAAGGTTCAGGTTACATTGGTTTGGAATTCAAGAAACGAAACTTCCCCTGGTTCAGATAAACTGAATTCATTGGCAAATTTCCTATGGAAAAAGGGTGGGCCACGGAGCAGGCTTCATTTAATACACTCTGTGTGGGCCAACTTTCAGACTTCTGATAAAAATATAATATTTGGGAATAGATGGAGACATCTTCTTGGAGAAAGAGATTTTTGGGAACATGTTGGTGGAATTGATGTGTCTTTGGCCCCTTCTAGTTTTGGCCAGGCAAATACACGGGCTTTTGATGCCTTGCTGCAGAAGTTACAGAAATATGTTCCATATGAATCATCTGTTACTGATTTGTATGCTGGAGCTGGGGTCATCGGGTTATCATTAGCCGCCACAAGAAAGTGCAGATCCATTAAATGCATTGAGATTAACAAAGAGTCAAAGGTATCTTTTGAGAAGACTGTTGAACGTTTGCCTGCCACCGTTGACAGCAGCATCACTTGGCATCACGCAGATGCTTCAAAAGATCCTTTTTCGTGGCTTGTGGGCTCAGATGTTGTAGTCATTGATCCTCCTAGAAAAGGACTAGATACATCTCTTATTGAGGCATTGAAGAATATATCATCAGTGGCACGTAAAGTTTTGTCATCATATGAAAGCTCAAACAACGTACAAGAAGAGAAACGACCATGGATTTTACGTGCTAATGAAGCTTCAGTCCATATCAAAAGCAAATCACCTGAGGAAAACGTTCCTCAATTGGTGCCACAAACACTTATTTATATAAGTTGTGGATGGGAAAGTTTTAAAGAGGACTGCAAGTCATTGTTGTCAAATAATGCATGGTATTTGGAAAAAGCTCACGCTTTTAATTTCTTTCCTGGTACTCAAAGCATTGAAGTTCTGGCAGTGTTCAAGAGGGGCCCTCAGAAAAAGAAATcaggaaagaaaaagaaaaaacacttgCAAAGAGCTGCTAGACAAAAATGA 1536 0.416 MTLRLITSPPIFPRFTCHATALPPSPQISTPTSISSTPQPPSLTCALHCSHFQSCSGCTHEHNLHHPVILDDAMNFFRRFGVTDFTFDSCNLWGWRCRAKLAVRGSSANPLIGLYEEGTHNVVDIPECKAHHPNINAAVELLRQGITELDVEPFLEDEGTGYLRYVQMAVTTHNTSLPAAQRYMSGKVQVTLVWNSRNETSPGSDKLNSLANFLWKKGGPRSRLHLIHSVWANFQTSDKNIIFGNRWRHLLGERDFWEHVGGIDVSLAPSSFGQANTRAFDALLQKLQKYVPYESSVTDLYAGAGVIGLSLAATRKCRSIKCIEINKESKVSFEKTVERLPATVDSSITWHHADASKDPFSWLVGSDVVVIDPPRKGLDTSLIEALKNISSVARKVLSSYESSNNVQEEKRPWILRANEASVHIKSKSPEENVPQLVPQTLIYISCGWESFKEDCKSLLSNNAWYLEKAHAFNFFPGTQSIEVLAVFKRGPQKKKSGKKKKKHLQRAARQK 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00604 511 Pfam Methyltransferase small domain 281 399 IPR007848 GO:0008168
Tsu04g00604 511 MobiDBLite consensus disorder prediction 491 511 - -
Tsu04g00604 511 Gene3D Vaccinia Virus protein VP39 427 487 IPR029063 -
Tsu04g00604 511 PANTHER BNAA06G32370D PROTEIN 23 490 - -
Tsu04g00604 511 Gene3D Vaccinia Virus protein VP39 273 426 IPR029063 -
Tsu04g00604 511 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 47 392 IPR029063 -
Tsu04g00604 511 CDD AdoMet_MTases 299 395 - -
Tsu04g00604 511 Gene3D - 96 272 - -
Tsu04g00604 511 ProSiteProfiles SAM-dependent methyltransferase RNA m(5)U-type domain profile. 1 490 IPR010280 GO:0006396|GO:0008173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00604 - - gmx:100816889 853.203