Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00589 ATGCCTGCTTTTCCCGATGAACCACTTCTCGCCTCTAACCCTGACCGTTTCTGTATGTTCCCGATTCAATACCCTAAAATTTGGGAAATGTACAAAAAAGCCGAAGCTTCATTCTGGACAGCAGAAGAAGTCGATCTCTCACAAGATCTTCCTCACTGGAACAACCTAACCGACGGCGAACGTCACTTCATCTCACACGTTCTTGCTTTCTTTGCCGCCTCCGACGGTATAGTCTTGGAGAATCTTGCCGGAAGATTCATGAAAGAAGTTCAAGTCTCTGAGGCACGTGCCTTTTACGGTTTCCAGATCGCGATTGAAAACATTCATTCTGAAATGTATAGTCTCTTGATTGAGACTTATATCAATGATTCTATCGAAAAGAATCGTTTATTTCATGCAATTGACACGATTCCTTGTATTGCCAAGAAAGCTGATTGGGCTATGAAATGGATCGATTCATCTGATTCATTTGCTGAAAGAATCGTTGCTTTTGCTTGTGTTGAAGGTATATTTTTCTCCGGTAGTTTCTGTTCAATTTTTTGGCTTAAAAAACGTGGTTTAATGCCTGGTTTAACTTTTTCAAACGAGCTTATTTCACGTGACGAAGGTCTTCATTGTGATTTTGCTTGTTTACTTTATTCGCTTTTGAGAAAGAAACTTAGTGAAGAGCGTGTGAAAACTATTGTTCGTGATGCGGTTGAAATTGAGAGAGAATTTGTTTGTGAAGCGCTTCCTTGTGCTTTGGTTGGAATGAACGGTGATTTGATGAGTCAATATATTGAGTTTGTTGCTGATAGATTATTGGGTGAACTTGGTTGTGGAAAAATTTATAATGTTCAGAATCCTTTTGATTGGATGGAATTGATTTCACTTCAGGGGAAAACTAACTTTTTTGAGAAGCGCGTTGGGGAATATCAGAAAGCTTCTGTTATGAATAGCTTAACTGCAAATGGTGGTGCTCATGTTTTCAAGTTGGATGAAGATTTTTAG 990 0.3899 MPAFPDEPLLASNPDRFCMFPIQYPKIWEMYKKAEASFWTAEEVDLSQDLPHWNNLTDGERHFISHVLAFFAASDGIVLENLAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLIETYINDSIEKNRLFHAIDTIPCIAKKADWAMKWIDSSDSFAERIVAFACVEGIFFSGSFCSIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSEERVKTIVRDAVEIEREFVCEALPCALVGMNGDLMSQYIEFVADRLLGELGCGKIYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMNSLTANGGAHVFKLDEDF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00589 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 6 329 - -
Tsu04g00589 329 ProSitePatterns Ribonucleotide reductase small subunit signature. 105 121 IPR030475 -
Tsu04g00589 329 SUPERFAMILY Ferritin-like 5 307 IPR009078 -
Tsu04g00589 329 CDD RNRR2 17 291 IPR033909 GO:0009263
Tsu04g00589 329 Pfam Ribonucleotide reductase, small chain 16 282 IPR000358 GO:0009263
Tsu04g00589 329 Gene3D Ribonucleotide Reductase, subunit A 3 307 IPR012348 GO:0016491
Tsu04g00589 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 6 329 IPR000358 GO:0009263
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00589 Tsu-Chr4 5483149 5484389 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00589 K10808 - qsu:112005137 612.838