Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu04g00523 ATGGGTAGCACATTCAATCCACAGATTTTAGTTGAAAAACTAGCCAAGCTGAATAGCTCACAGACAAGCATAGAGACTTTGTCACATTGGTGCATATTTCATATGAACAAAGCCAAACTAGTTGTCGAAACATGGGCAAAACAGTTCCATTGCTCTCCTCGTGAGAAGAAGTTGGCTTTTCTGTTTCTTGCAAATGATATTTTACAAAACAGCAGGCGAAAGGGTTCTGAATTTGTAGGTGAATTTTGGAAGGTTCTTCCAGATGCTCTTCGAGATGTCATTCAAAATGGAGACGACTATGCAAGGAATCAAGCGATGCGACTGGTTGGTATATGGGAAGAAAGAAAAGTTTTTGGTTCTCGTGGTCAAATTCTCAAGGAAGAAATTGTTGGGAGGCATGCGGAAAACAGTAACCGTGATGTGAAACCTATGAATGTGAAACCAACGAATGTGAAACCTGTGAATGCAAAACTGAGGCCATCTGCTGGGAATGCATTGGATAAGATAGTTTCTGGCTATCATCATATTTATGGAGGACAGACAGATGAAGATGCTGTATTAAGCAAATGCAGGAATGTCATTAGCTCTCTTGAGAAAGCAGATAATGATAGTAATTCGGGGAACCTCCATGGATCTACAGTAGTGAATGAGCTCCAGGGGAATAATGACATACTAAAGGACTGCATTGAGCAGTTAACAGCAATAGAATCATCAAGAGCTGGCCTTGTGTCTCACCTGAGAGAGGCACTTCAGGATCAGGAATTCAAGCTGGATCAAGTCCGTAACCAAATTCAGGCTGCTCGTGTTCAGTGGGAGCATGCGAACAATACTTGCCAACAATTACTGAATGGCAACAATATTCAGTCATTAGTTGAACAGAGCTCAAAGGAAGTTCAAACCTCCATGATACCTGCCAATTTTATCTCTGGTGGGGAGCAATCAGCCCCATTAATGTATACACCACAAGGGCTGTATTATCAAAGTTCTGGACATGGTGAAGAAGATCCGCGCAAGTCTGCAGCCGCCGCAGTGGCAGCAAAGCTTACTGCATCCACATCGTCCATCCAGATGCTGTCTTGTGTGCTATCCTCTTTCGCAGCATCAGAAGGTGTCATAGGCAATCCGATGACAGAGTCTTCTGCTGAATATCACTCTGAAAAGAGGACTAAGATTGAAAATGGCCAGTCATCTTACGTGCCATCTCAGAATCCTCAACAACCTCTTCCCCCATATTCACTTTCTGAAACTACCCAACACAATGCATCTACATCCAATGAGCAGTATACTCCAAATGATCAACCACCACCTCCACCCTCATCATCACCACCCCCATTACCCCCACTGCCACCAACACCTCAACAATACCCGGTGCCACAGTATATGCCGACTGTTGGATCCGTTAACAATATGGCATACAACTATGGCGTGATGCAACAACAGCCATCAATGGCAACCTATCCTGCAGCTGGGGTTGCCATGAACAATGTTTCTCCTTATACACCTCCTATGAATGCTTATCAGGGTTTTCAGGGTTCTGATGGAAATTACTATAACCAGTCCTCAGTGCCTGTGGTCCCCATCTCTCGCCAACTTGTAGGCATGTCTTCACTTGCTGCTGAATCTGTTACTGATGTAATTTTTCATCAGTGCTACTGGCTAGCTTGCATATCTTTAAAAGATTTGCATTTTCCCCTACAGGTGCCTGGTGGACAGTTGTGTACAGACCGGGCTTAA 1734 0.44 MGSTFNPQILVEKLAKLNSSQTSIETLSHWCIFHMNKAKLVVETWAKQFHCSPREKKLAFLFLANDILQNSRRKGSEFVGEFWKVLPDALRDVIQNGDDYARNQAMRLVGIWEERKVFGSRGQILKEEIVGRHAENSNRDVKPMNVKPTNVKPVNAKLRPSAGNALDKIVSGYHHIYGGQTDEDAVLSKCRNVISSLEKADNDSNSGNLHGSTVVNELQGNNDILKDCIEQLTAIESSRAGLVSHLREALQDQEFKLDQVRNQIQAARVQWEHANNTCQQLLNGNNIQSLVEQSSKEVQTSMIPANFISGGEQSAPLMYTPQGLYYQSSGHGEEDPRKSAAAAVAAKLTASTSSIQMLSCVLSSFAASEGVIGNPMTESSAEYHSEKRTKIENGQSSYVPSQNPQQPLPPYSLSETTQHNASTSNEQYTPNDQPPPPPSSSPPPLPPLPPTPQQYPVPQYMPTVGSVNNMAYNYGVMQQQPSMATYPAAGVAMNNVSPYTPPMNAYQGFQGSDGNYYNQSSVPVVPISRQLVGMSSLAAESVTDVIFHQCYWLACISLKDLHFPLQVPGGQLCTDRA 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu04g00523 577 MobiDBLite consensus disorder prediction 395 429 - -
Tsu04g00523 577 Pfam CID domain 9 120 IPR006569 -
Tsu04g00523 577 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 530 - -
Tsu04g00523 577 PANTHER OS01G0925000 PROTEIN 1 530 - -
Tsu04g00523 577 Coils Coil 243 270 - -
Tsu04g00523 577 ProSiteProfiles CID domain profile. 2 134 IPR006569 -
Tsu04g00523 577 MobiDBLite consensus disorder prediction 430 457 - -
Tsu04g00523 577 CDD CID_RPRD_like 7 129 - -
Tsu04g00523 577 SUPERFAMILY ENTH/VHS domain 11 117 IPR008942 -
Tsu04g00523 577 MobiDBLite consensus disorder prediction 395 460 - -
Tsu04g00523 577 Gene3D - 2 130 IPR008942 -
Tsu04g00523 577 SMART 558neu5 9 130 IPR006569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu04g00523 Tsu-Chr4 4861164 4866781 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu04g00523 K15559 - gmx:100806108 728.013