Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03253 ATGATTCAACAATTGGTTGATCATGTCCTTGCTGTCATTAAAGAGTCAGTGAAGGCTATTACTACAGAATCATTGAACAGTATTATTAGGATAATCAATGGAGTATCAGCACTTTTGTTGGCATTACTTCCTGGGAATGCTAAAATACTTGAAGGTATTCATGGTTGGGAACTCAGACCAACTTTCCGAGGACCACGGTTACCTCGATGGATGGAGAAtggcGCGTCTTCATTCAACCAATTCATCCACGAACTTTCTGTGGATTCTGATAACTCAAGCGTCGAATACTCATCATCTGGAGAAGAAGATAGTGATAGATGTGAATGCCCTCCATCTCCTTATAGTTCTAGAGCCTCCGAAGCCGCCTATACTAAATTCAATAGGCATCAAATGAATTGGATCCAATATATCTTACTTTGGATTGTACTTCCTATAAAATTTATGCTGAGGATTCCGCTTCGTCTTCTCCGGTTATCTTATTTTGTAGTGTCAAAAGCCCTACATATCTCCAGAGAGAAACGCCCTCCACATTTACATGCATATAAGAGGGTGCAAAGCCTCAAGGAACACTTTATCCACCGTGCTACTGATAGGAGACGCGGCGTTGTAGAGGATCTTCATCTCGGAATAGAGTATTGTATAGAAGCCGTCTTTGATGTTGTTCACAAGGCAGCGCATCTTGTTCTATCTCCGTCAAAAGCTTTTGGTGCATTATTCAGTTTGTTTTCATCTCATGAAAATGGAGTTAAAGAAACTCGCAATGCTGTTGAGGATGCATCGATTTCTACAGCCAGGCTAGAGGGTGAAGACCAGAGGATAACTAATTACGAGTCTCTGAATACAGATGCTCGTACATGTCAGGATGTCATAACAGATCTCGGGTATCCGTATGAAGCTATTAAGGTGATCACTGCTGACGGATATATTATTCTTTTGGAACGAATACCTAGACGAGATTCAAGAaaagctgtctttcttcagcaTGGAGTTTTTGATTCATCAATGGGTTGGGTATCTAATGGTGTTGTTGGATCTCCAGCTTTTGCAGCCTATGATCAAGGGTATGATGTATATCTTGGGAATTTTCGTGGTTTGGTTTCCAGGGAACATGTCAATAAAAACATATCATCACGACAATACTGGAAGTACTCCGTCAATGAGCACGGGACGGAAGATATTCCTGCTATGATAGAGAAAATCCATGAAGTGAAAACAGCTGAATTGAAGCTTAGTACACCTGATATTGAGGACAAAATCAATGGTGATCAGCCTTACAAGCTTTGTGCAATTTCTCATAGTTTGGGAGGAGCTGCAATGATAATGTATATTGTTACGCGAAGGGTAGAAGAGAAGCCACATAGACTTTCAAGATTGGTTTTATTATCTCCGGCCGGTTTTCATGACGACTCTAACATAGTTTTCTCCGCGGCAGAGATTCTGTTATCTATTATGGCTCCTATTTTGTCTCAAGTTGTTCCTGCATTCTATATACCTACAAGATTTTTTCGCATGCTTGTCTTTAAGTTAGCTCGGGATCTTCATAACCTACCTGCAGTTGGAGGACTTGTTCAAACCCTAATGAGCTATGTTGTTGGCGGAGACAGTTCAAATTGGGTTGGAGTTTTAGGACTGCCACACTACAACATGAACGACATGCCGGGAGTATCTTTTCGTGTTGCTCTCCATCTTGCACAGATTAAGCGTGTAGGAAGGTTTAGAATGTTCGATTACGGGAGTGCCTCCGCCAATAGAAAGGTGTATGGTTCACCTGAGCCTTTGGACTTAGGTCAACACTATGGACTCATTGACATTCCCATTGATCTCGTTGCCGGACATAAGGACAAAGTTATAAGACCTTCAATGGTAAAAAGACACTATAGATTGATGAAAAATGCTGGTCTAAATGTTTCGTATAATCAGTTTGAATATGCTCATTTGGACTTCACATTCTCGCATCGCGAAGAACTCTTGTCATATGTTATGTCACGCTTGTTGCTCGTTGATCCGAACTCAAAGCATCAAGTGAATCAAATGGTTGCAAAACCGGGGGGAAAAGAACAAGTTGAAGCTAGCAAGTAG 2079 0.4064 MIQQLVDHVLAVIKESVKAITTESLNSIIRIINGVSALLLALLPGNAKILEGIHGWELRPTFRGPRLPRWMENGASSFNQFIHELSVDSDNSSVEYSSSGEEDSDRCECPPSPYSSRASEAAYTKFNRHQMNWIQYILLWIVLPIKFMLRIPLRLLRLSYFVVSKALHISREKRPPHLHAYKRVQSLKEHFIHRATDRRRGVVEDLHLGIEYCIEAVFDVVHKAAHLVLSPSKAFGALFSLFSSHENGVKETRNAVEDASISTARLEGEDQRITNYESLNTDARTCQDVITDLGYPYEAIKVITADGYIILLERIPRRDSRKAVFLQHGVFDSSMGWVSNGVVGSPAFAAYDQGYDVYLGNFRGLVSREHVNKNISSRQYWKYSVNEHGTEDIPAMIEKIHEVKTAELKLSTPDIEDKINGDQPYKLCAISHSLGGAAMIMYIVTRRVEEKPHRLSRLVLLSPAGFHDDSNIVFSAAEILLSIMAPILSQVVPAFYIPTRFFRMLVFKLARDLHNLPAVGGLVQTLMSYVVGGDSSNWVGVLGLPHYNMNDMPGVSFRVALHLAQIKRVGRFRMFDYGSASANRKVYGSPEPLDLGQHYGLIDIPIDLVAGHKDKVIRPSMVKRHYRLMKNAGLNVSYNQFEYAHLDFTFSHREELLSYVMSRLLLVDPNSKHQVNQMVAKPGGKEQVEASK 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03253 692 PANTHER ALPHA/BETA HYDROLASE FAMILY PROTEIN 9 675 - -
Tsu03g03253 692 MobiDBLite consensus disorder prediction 92 113 - -
Tsu03g03253 692 Pfam Partial alpha/beta-hydrolase lipase region 287 341 IPR006693 GO:0006629
Tsu03g03253 692 Gene3D alpha/beta hydrolase 275 665 IPR029058 -
Tsu03g03253 692 SUPERFAMILY alpha/beta-Hydrolases 284 661 IPR029058 -
Tsu03g03253 692 PANTHER LYSOSOMAL ACID LIPASE-RELATED 9 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03253 Tsu-Chr3 44850702 44856043 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03253 2 676 Lipid Metabolism Gene Families AT1G18460 64.586 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03253 - - gmx:100785917 1098.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g03253 03 44850702 44856043 Tsu03g03253 03 44850702 44856043 ECH
Tsu02g00184 02 1574754 1578934 Tsu03g03253 03 44850702 44856043 PCT