Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03250 atgaaatttgtAATTGCAGGGGATAAATATTTTGGTTTGAAATATAACAAAGATAGGAGTGTTCTATTGACAGTGGTAGCCAGTGGAAAAGGTGGTGGTTTGTTGGATAAGCCACCAACAATAGAGAAAACAACACCTGGTCGAGAATCTGAATTCGATTTAAGGAAATCCAAGAAAACATCACCACCATACAGAGTAATGTTACACAATGACAACTATAATAAAAGAGAATATGTAGTACAAGTGTTGATGAAAGTGATACCTGGAATGACAGTTGATAATGCAGTTAACATCATGCAAGAGGCACATTATAATGGATTAGCAGTGGTAATTATATGTGCTCAAGTTGATGCTGAAGATCATTGCATGCAATTGAGAGGAAATGGTCTTTTAAGTTCAATTGAGCCAGGTGATGGTGGTTGTTGA 426 0.3568 MKFVIAGDKYFGLKYNKDRSVLLTVVASGKGGGLLDKPPTIEKTTPGRESEFDLRKSKKTSPPYRVMLHNDNYNKREYVVQVLMKVIPGMTVDNAVNIMQEAHYNGLAVVIICAQVDAEDHCMQLRGNGLLSSIEPGDGGC 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03250 141 Gene3D - 58 136 IPR014719 -
Tsu03g03250 141 MobiDBLite consensus disorder prediction 42 58 - -
Tsu03g03250 141 Pfam ATP-dependent Clp protease adaptor protein ClpS 59 127 IPR003769 GO:0030163
Tsu03g03250 141 MobiDBLite consensus disorder prediction 36 58 - -
Tsu03g03250 141 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTIC 5 141 IPR022935 GO:0006508
Tsu03g03250 141 PANTHER ATP-DEPENDENT CLP PROTEASE ADAPTOR PROTEIN CLPS 5 141 - -
Tsu03g03250 141 SUPERFAMILY ClpS-like 58 135 IPR014719 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03250 Tsu-Chr3 44838496 44840684 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03250 K06891 - gmx:100306117 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g03250 03 44838496 44840684 Tsu03g03250 03 44838496 44840684 ECH