Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03246 ATGgctttcaaaaaatcacttatttccTTCATCACCTTATCACTTTTCATCACAACACTCTCTCTTCTTCCATCTTTAACTTCATCTAGAGTCACTCCATCATCACACACTTCACTTCTTGATGTCTCTTCCTCAATTCAACAAACCAAACAAGTCCTTAACTTTAACCCTAAAAACAACACTTTTCTAGAAGAATCTAATACCCAACTTCAACAAAAACccatttcaaattcttcaacTTCATTCTCAATTCTCATACACCCAAGAGAGACTCTTTTGAATGAAAACCACAAAGACTATAAAAATCTAATCTTGTCACGACTCGCTCGTGACTCAGCCCGAGTCAACTCACTTAACATAAAACTCAATCTTGCTATAAACAACATCAAAAAATCGGATCTTCACCCGACCCAAACGGAGCTCCAACAAGAAGATCTCTCTACACCTGTTTCCTCCGGAATCAGTGCCGGCTCCGGCGAGTATTTCACTCAACTCGGAATCGGTCAACCCGCTAAACCGCTCTACATGGTTCTCGACACAGGAAGTGATGTTAACTGGATCCAATGCAAACCCTGCTCCGATTGTTACCAACAATCCGACCCAATTTATGACCCGACTTCATCTTCAACCTACGAATCATTAACCTGTCAAACACAACAGTGTCAACAATTAGACACTTCCGCTTGTCGTGACGGTAAATGTCTCTACCAAGTTGCCTATGGTGACGGTTCTTTCACCGTCGGCGAATATATAACAGAAACCGTTTCTTTTGGTGGATCCGGGTCAGTGAACCGGGTCGCAATTGGCTGTGGCCATGATAATGAAGGTTTATTCGTCGGAGCTGCTGGTTTACTCGGACTCGGTGGTGGGTCACTCTCTTTAACATCACAAATTAAAGCTACATCGTTTTCTTATTGTTTAGTTGATCGTAACTCACCAAAATCGTCCACTCTTGATATCAACTCGGTTCAACCCAGTGACTCAGTAACAACAAAGttgttaaaaaatcaaaaagttgACACGTTTTACTTCATGGACCTGACCGGAATTAGTGTCGGAGGTCAAATGGTTGCCATTCCGCCGCAAGTTTTTGCCGCCGATGGATCTGGTGGTGGTGGAATAATTATTGACTCGGGAACGGCGATAACTCGGTTACAGACTCAAGCATATAACTCAGTTCGTGACTCGTTTAAAAAACTTACTCAGAATTTACGTTCTGCTGAAGGTTTTGCATTGTTTGACACGTGTTATGATTTGTCGAATTTGCAAAGTGTTCGTGTTCCTACGGTGTCGTTTCATTTTGGTGAAAATAAGGTTTGGAATTTGCCGGCGAAGAATTATTTGATTCCGGTGGATACTGCCGGaactttttgttttgcttttgctCCGACACCGTCGTCTTTGTCTATTATTGGAAATGTTCAACAACAAGGGACACGTGTCAGCATTGATCTTGTGAACTCTTTGATTGGATTCTCACCCAATAAGTGctag 1494 0.4016 MAFKKSLISFITLSLFITTLSLLPSLTSSRVTPSSHTSLLDVSSSIQQTKQVLNFNPKNNTFLEESNTQLQQKPISNSSTSFSILIHPRETLLNENHKDYKNLILSRLARDSARVNSLNIKLNLAINNIKKSDLHPTQTELQQEDLSTPVSSGISAGSGEYFTQLGIGQPAKPLYMVLDTGSDVNWIQCKPCSDCYQQSDPIYDPTSSSTYESLTCQTQQCQQLDTSACRDGKCLYQVAYGDGSFTVGEYITETVSFGGSGSVNRVAIGCGHDNEGLFVGAAGLLGLGGGSLSLTSQIKATSFSYCLVDRNSPKSSTLDINSVQPSDSVTTKLLKNQKVDTFYFMDLTGISVGGQMVAIPPQVFAADGSGGGGIIIDSGTAITRLQTQAYNSVRDSFKKLTQNLRSAEGFALFDTCYDLSNLQSVRVPTVSFHFGENKVWNLPAKNYLIPVDTAGTFCFAFAPTPSSLSIIGNVQQQGTRVSIDLVNSLIGFSPNKC 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03246 497 Gene3D Acid Proteases 135 317 IPR021109 -
Tsu03g03246 497 Gene3D Acid Proteases 318 497 IPR021109 -
Tsu03g03246 497 Pfam Xylanase inhibitor C-terminal 343 493 IPR032799 -
Tsu03g03246 497 Pfam Xylanase inhibitor N-terminal 161 318 IPR032861 -
Tsu03g03246 497 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 374 385 IPR001969 GO:0004190|GO:0006508
Tsu03g03246 497 PANTHER PROTEIN ASPARTIC PROTEASE IN GUARD CELL 1 18 497 - -
Tsu03g03246 497 ProSiteProfiles Peptidase family A1 domain profile. 161 493 IPR033121 -
Tsu03g03246 497 PANTHER ASPARTYL PROTEASES 18 497 IPR001461 GO:0004190|GO:0006508
Tsu03g03246 497 SUPERFAMILY Acid proteases 154 497 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03246 Tsu-Chr3 44810463 44812395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03246 138 497 Miscellaneous Gene Families AT1G77480 26.667 3.44e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03246 K22683 - gmx:100784849 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g03246 03 44810463 44812395 Tsu03g03246 03 44810463 44812395 ECH