Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03154 ATGAAGAACAACAATAAGGATCAACAAGGTATAGGTATAGCCTCAACATATCTAAACTTTTTCAATGCTCAATTAtatcttttcaatttctttggTCATATTCTAGTATTTGGTTGTGGTTTAGTCATAGGTATCACACTCactttttgtgtcaaaaaattttcattcaactttCAATTCCAACAATTTCAAGATCCATCTTTTACCTCTAATAATCCACCCCCTCTTTTACCTCCTACACCTCCAATCTCATCAAACATCTCAAATCCATCAAATAACCTAACAAAAATTTCTATCAATCAAAAGAGTTTGGTTATTACCAATACTACTAGTATTAAGCCTAGTTCAAATGGGTTAGAAGAATTTTTGAAGATTCCAATGGCTATGCATGATATGAATGAGGATGAATTATTTTGGAGAGCTACTATGATTCCTATGATTCATAAAACTCCATTCAAACAAACACCAAAGGTTGCATTTATGTTTTTGACAAAAGGTGCTATTTTATTGGCTCCACTTTGGGAGAAATTCTTTAAAGGTAATGAAGGGTTGTATTCAATCTACATTCATCCAAATCCTTCTTTTAATGAAACGGTTTATGATCAAAGCTCTATCTTTTATGGCCGCAGAATCCCTAGCAAGGAGGTAAAGTGGGGTGAGAATAGCATGATAGAGGCAGAAAGACGTTTACTAGCAAATGCATTACTTGATTTCTCAAACCAACGTTTTGTACTACTTTCAGAAGCATGCATACCATTATTCAATTTCTCCACTATCTACAATTATCTAATGAACTCAAAGAAAACTTTTATTGAAGCCCTTGATATAGAAGGTGGTGTAGGACGTGGAAGATACAACAATAAAATGAGACCATTGATTAAACTTTCACAATGGAGAAAAGGGTCACAATGGTTTCAAATTGATCGTAACTTAGCACTTCATATAGTTTCTGacaacttatatttttctatgTTCAAGAAATTTTGCAACCCTCCATGCTATAGTGATGAACATTATTTGCCAACATTGGTTAGTATCAAATTTTGGAAGAGAAATTCTAATAGGACATTGACTTGGGTTGATTGGTCAAAAGGTGGACCCCATCCTTCAAAGTTTATTAGACCTCATGTGACTATTGATTTTTTGGAGAGGTTAAGGTTTGGAAGCACTTGTGAGTACAATGGAAAGACAACCAATGTTTGTCATTTGTTTGCAAGGAAATTCACTACTCATGCTTTGGATAGATTGCTTAGATTTGCTCCAAAGTTGATGCAATTCAATTGA 1284 0.3255 MKNNNKDQQGIGIASTYLNFFNAQLYLFNFFGHILVFGCGLVIGITLTFCVKKFSFNFQFQQFQDPSFTSNNPPPLLPPTPPISSNISNPSNNLTKISINQKSLVITNTTSIKPSSNGLEEFLKIPMAMHDMNEDELFWRATMIPMIHKTPFKQTPKVAFMFLTKGAILLAPLWEKFFKGNEGLYSIYIHPNPSFNETVYDQSSIFYGRRIPSKEVKWGENSMIEAERRLLANALLDFSNQRFVLLSEACIPLFNFSTIYNYLMNSKKTFIEALDIEGGVGRGRYNNKMRPLIKLSQWRKGSQWFQIDRNLALHIVSDNLYFSMFKKFCNPPCYSDEHYLPTLVSIKFWKRNSNRTLTWVDWSKGGPHPSKFIRPHVTIDFLERLRFGSTCEYNGKTTNVCHLFARKFTTHALDRLLRFAPKLMQFN 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03154 427 PANTHER CORE-2/I-BRANCHING ENZYME 9 426 - -
Tsu03g03154 427 Pfam Core-2/I-Branching enzyme 158 385 IPR003406 GO:0016020|GO:0016757
Tsu03g03154 427 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 9 426 IPR044174 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03154 Tsu-Chr3 43581779 43586716 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03154 - - gmx:100791882 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g03154 03 43581779 43586716 Tsu03g03154 03 43581779 43586716 ECH