Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g03112 ATGACTATGAAAACACCTGGAACACCTGCTTCAAAGATAGAGAGGACACCGGTATCAACACCGGGAGGGCCAAGAGCGAGGGAGGACAAGATTGTGGTTACAGTAAGGTTAAGGCCTTTAAACAGAAGGGAACAATTGGCTAAAGATCAGGTGGCATGGGATTGCATTGATGATTATACTATTATGTATAAACCGCCCCCACAAGAACGTGCTGCTCAACCAGCATCATTTACTTTCGACAAAGTTTTCGGTCCTGCTTCTGTAACCGAGGCAGTATATGAAGAAGGAGTGAAGAATGTCGCATTATCTGCACTGATGGGGATCAATGCTACTGTTTTTGCTTATGGACAAACCAGCAGTGGAAAGACATACACTATGAGAGGAATTACAGAGAAGGCTGTCAATGATATTTATAATCATATAATGAATAACCCTGAAAGAAATTTCACCATAAAAATATCTGGGCTGGAAATATACAATGAGAACGTGAGAGACTTGTTAAATACAGAACCTGGTCGAAGTTTGAAGCTTCTAGATGATCCTGAGAAAGGTACTGTGGTTGAGAAATTGGTGGAAGAAACAGCAAAGGATGATCAACACTTAAGACATTTGATCTCCATTTGTGAAGCTCAAAGACAGGTGGGCGAAACTGCTCTGAACGATAACAGCTCGAGGTCTCACCAGATAATAAGACTGACAATTCAAAGTACTCTTCGTGAAACCGCAGATTGTGTGAAATCTTTTGTTGCTACCCTGAACTTTGTTGATCTGGCTGGAAGTGAGAGGGCTGCACAAACACATGCAGATGGAACTAGGCTCAAAGAAGGCTGCCATATTAACCTTAGCTTGATGACTCTTACAACTGTTATCAGGAAGCTCAGTGTTGGAAAAAGAAGTGGCCATATACCTTATAGAGATTCGAAGCTCACACGTATATTGCAACATTCTCTTGGTGGGAATGCACGGACTGCCATCATATGTACTTTGAGTCCAGCCCTAAGCCATGTAGAGCAATCGCGAAACACTCTCTACTTTGCTACCCGGGCAAAGGAAGTTACAAATAATGCTCAAGTAAACATGGTCGTACCAGACAAGCAGCTTGTTAAACACTTGCAAAAAGAAGTGGCGAGGCTGGAGGCAGTTCTACGCACTCCTGATCCATCTAAAGAAAAGGATTGGAAGATTCAACAgATGGAAATGGAAATTGAAGAGCTGAGACGTCAGAGAGATCAAGCTCAAACTGAAGTGGATGAGTTACGAAGAAAGCTTCATGAAGACCAGCAGGTCCCAAAGCCAGTTGAAGCAGCACATTCTTCAGTCAAGAAGTGCCTATCTTTCACTGGTGCACTGTCATCACCAAAACCAGGGTTAGGTTGCGAGAGAGTGAGAAACACGTCATTAAGGCAGTCCATCAGGCAATCATCTACTGCTCCTTTTACCCTTATGCATGAAATTCGCAAACTTGAGCACCTCCAGGAGCAGTTAGGCGAAGAAGCCAACCGAGCTTTGGAAGTATTACAAAAAGAAGTGGCATGTCATAGACTAGGGAACCAAGATGCAGCTGAGACAATTGCAAAGCTGCAAGCAGAAATAAGGGAAATGCGTTTGGTTAAGCCATTGCCCAAGGAAGTTGTAGTTGGAAGTATGGTTTCTGTCAACAAGAGTGTCAGTGCTAATCTAAAGGAAGAGATTACCAGACTTCATTCACAAGGAAGCACCATTGCAAATCTTGAGCAGCAGCTTGAGAACGTGCAAAGGTCTATAGACAAGTTGGTGATGTCTCTTCCTAACAATTTTCAAACTTTAGCCTGTGAAGCATCCCCCAAGAATAAAAAGGAAAGTAAAAGGAAAAAGTTGCTTCCTTTGGCTTCAAGTAACTCTGGAAATCGCCCAAACTTTATTAGATCTCCCTGCTCGCCATTATCTACTACTAAACAAGTTATGGAATCTGATATTGAAAATAAACCTCCTGAGAATGATGATAATGTTTCAACAGAAATTCATCCTGAGTCCGAGAAGGATACTCCCTCCAAGGGTGAAGAAGCTGGCGAtgttacatcaaaggaaaatACTCCAAGTCCAGGTTACCGCCGCTCTAGTTCAGTTAACATGAAGAAAATGCAGAAAATGTTTCAGAATGCCGCAGAGGAGAATGTAAGAAGTATAAGAGCATATGTCACAGAATTGAAAGAACGTGTGGCCAAGCTGCAGTACCAAAAGCAGTTACTCGTTTGCCAGGTACTTGAGCTTGAAGCGAATGAAGCAAGTGGCCACAACATAGAAGATGAAGCATACCCAAATGAACCGGAGGAACCTCAAGTCTCATGGCAAGTAACATTTAAAGAGCAGCGGCATCAGATCCTTGAATTATGGGATGTATGTTATGTCTCCATTATTCACAGGACTCAGTTTTATTTGCTATTCAAGGGAGATCCAGCTGATCAAATATATATGGAGGTTGAACTGAGGAGATTAACATGGTTGCAACAACATCTAGCAGAACACGGGAATGCAAGTCCAGCTCCTAATGTTGGAGGAGATGAACTAACTGTCTCACTGTCATCAAGTATGAGAGCattgaaaagagaaagagaatttCTTGCTAAGAGATTGATATCGCGTTTGACGCTGGAAGAGAGGGAGGAACTATATATGAAATGGGATGTCCCTCTTGATGGGAAGCAGAGGAAAATGCAATTTGTCAGTAAGCTTTGGACAGATCCCTATGATCAAAAGCATGTACAGGAAAGTGCTGAAATAGTTGCAAAGCTGGTGGGTTTCTGCACAGGAGGTAACATGTCAAAGGAGATGTTTGAGCTGAATTTTGTGCTTCCATCTGATAAGAGGCCATGGTTAATGGGCTGGAATCATTTGACAAACTTGCttaatttatga 2895 0.419 MTMKTPGTPASKIERTPVSTPGGPRAREDKIVVTVRLRPLNRREQLAKDQVAWDCIDDYTIMYKPPPQERAAQPASFTFDKVFGPASVTEAVYEEGVKNVALSALMGINATVFAYGQTSSGKTYTMRGITEKAVNDIYNHIMNNPERNFTIKISGLEIYNENVRDLLNTEPGRSLKLLDDPEKGTVVEKLVEETAKDDQHLRHLISICEAQRQVGETALNDNSSRSHQIIRLTIQSTLRETADCVKSFVATLNFVDLAGSERAAQTHADGTRLKEGCHINLSLMTLTTVIRKLSVGKRSGHIPYRDSKLTRILQHSLGGNARTAIICTLSPALSHVEQSRNTLYFATRAKEVTNNAQVNMVVPDKQLVKHLQKEVARLEAVLRTPDPSKEKDWKIQQMEMEIEELRRQRDQAQTEVDELRRKLHEDQQVPKPVEAAHSSVKKCLSFTGALSSPKPGLGCERVRNTSLRQSIRQSSTAPFTLMHEIRKLEHLQEQLGEEANRALEVLQKEVACHRLGNQDAAETIAKLQAEIREMRLVKPLPKEVVVGSMVSVNKSVSANLKEEITRLHSQGSTIANLEQQLENVQRSIDKLVMSLPNNFQTLACEASPKNKKESKRKKLLPLASSNSGNRPNFIRSPCSPLSTTKQVMESDIENKPPENDDNVSTEIHPESEKDTPSKGEEAGDVTSKENTPSPGYRRSSSVNMKKMQKMFQNAAEENVRSIRAYVTELKERVAKLQYQKQLLVCQVLELEANEASGHNIEDEAYPNEPEEPQVSWQVTFKEQRHQILELWDVCYVSIIHRTQFYLLFKGDPADQIYMEVELRRLTWLQQHLAEHGNASPAPNVGGDELTVSLSSSMRALKREREFLAKRLISRLTLEEREELYMKWDVPLDGKQRKMQFVSKLWTDPYDQKHVQESAEIVAKLVGFCTGGNMSKEMFELNFVLPSDKRPWLMGWNHLTNLLNL 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g03112 964 MobiDBLite consensus disorder prediction 1 15 - -
Tsu03g03112 964 Gene3D Kinesin motor domain 24 383 IPR036961 -
Tsu03g03112 964 Coils Coil 567 594 - -
Tsu03g03112 964 Coils Coil 488 508 - -
Tsu03g03112 964 MobiDBLite consensus disorder prediction 686 703 - -
Tsu03g03112 964 Coils Coil 388 429 - -
Tsu03g03112 964 Coils Coil 517 537 - -
Tsu03g03112 964 PANTHER KINESIN-LIKE PROTEIN KIN-7A 14 963 - -
Tsu03g03112 964 Pfam Kinesin motor domain 36 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03112 964 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 385 IPR027417 -
Tsu03g03112 964 MobiDBLite consensus disorder prediction 604 703 - -
Tsu03g03112 964 MobiDBLite consensus disorder prediction 620 650 - -
Tsu03g03112 964 SMART kinesin_4 28 360 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03112 964 Pfam Domain of unknown function (DUF3490) 780 944 IPR021881 -
Tsu03g03112 964 PRINTS Kinesin heavy chain signature 107 128 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03112 964 PRINTS Kinesin heavy chain signature 217 234 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03112 964 PRINTS Kinesin heavy chain signature 251 269 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03112 964 PRINTS Kinesin heavy chain signature 302 323 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03112 964 MobiDBLite consensus disorder prediction 1 27 - -
Tsu03g03112 964 CDD KISc_CENP_E 30 352 - -
Tsu03g03112 964 PANTHER CENTROMERE PROTEIN E 14 963 - -
Tsu03g03112 964 MobiDBLite consensus disorder prediction 651 685 - -
Tsu03g03112 964 ProSiteProfiles Kinesin motor domain profile. 30 352 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Tsu03g03112 964 ProSitePatterns Kinesin motor domain signature. 250 261 IPR019821 GO:0003777|GO:0005524|GO:0007018
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g03112 Tsu-Chr3 42889569 42895063 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g03112 21 427 Miscellaneous Gene Families AT5G06670 38.462 4.18e-79 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g03112 K11498 - gmx:100806354 1681.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g03112 03 42889569 42895063 Tsu03g03112 03 42889569 42895063 ECH