Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02768 ATGGCTCCAAAGACCGGAAAAACAAAACCGCACAAAACTAAaggggaaaaaaagaaaaaagaagagaaagTTTTGCCGACTGTTATTGAAATTACGGTAGAAATACCAGATGGTTCACAAGTTACCCTCAAGGGCATCTCTACAGACAGGATACTAGATTTAAGAAAGCTCTTAGCAGTTCATGTTGAGACTTGTCACTTGACTAACTTCTCCCTATCTCACGAGGTGCGAGGCGAGAGGCTGAAAGATAACGTGGAAATCGTATCACTCAAACCGTGTCATGTCTCAATCGTTCAAGAGGACTACTACACGGAAGAGGTTGTGGTGACGCATATTCGCCGACTTTTAGACATCACTGCCTGCACCTCAGCCTTTGGGAAACTACCCGCCACCGGGCGAGGGTCAGTCGAAAATGGGTCCCCGAAACCCAAAACCCCCAACGATCAGAATTTGGACTTGGGTGGTGATGTCTCCATGTATCCACCACCTAGACTTGGACAATTCTATGacttcttttccttttcacaCCTTATACCCCCATTTCATTACATACGAAGATCAAACCGTCCATTCCTTGAGGATAAGACAGAGGATGATTTCTTTCAGATTGATGTTAGGGTTTGCAGTGGCAAACCAACTACAATTGTTGCCTCTAGGAAAGGATTCTATCCTGCTGGAAAACGTCTTCTTATTAGCCATGCATTGGTGCCTCTCTTACAGCAGATAAGCAGGGTGTTTGATTCTGCGTACAAAGCTCTTATGAAGGCATTTACAGAACACAATAAGTTTGGCAATCTTCCTTACGGTTTTCGTGCAAACACATGGGTTGTCCCTCCAGTTGTTTCCGACAATCCAGGTGTGTTTCCACCACTGCCTATGGAAGATGAAACTTGGGGAGGAAATGGAGGTGGTCAAGGAAGAGATAGTAAACATGAAAAGAGACAATGGGCTAGAGATTTTGCAATCCTAGCTGCAATGCCCTGTCAAAATGCAGAAGAGAGGCAAATTCGAGATAGGAAAGCCTTTTTGCTTCATAGTTTATTCGTAGATGTATCAGTCTTCAAAGCAGTTTCTGCAATTAAGCATTTTAAAGATAGCAAGCAAAGCTCTATTAGTAATAATGCTCCATCTTCATATGAAGAAAGAATTGGTGATTTAACTGTTAAGGTGATAAGAGATTTATCTGATGCAAGCACTAAGTTGGACTGCAAAAATGATGGGACTCTGGTTCTTGAATTATCAGAGGAAGAACTTGCTCAGAGAAACTTGCTTAAAGGCATAACTGCTGATGAAAGTGCAGCTGTTCATGACACTCCTACTTTAGGTGCAGTGATTATACGACATTGTGGCTACACAGCCGTGGTAAAGGTTTCACCTGAGACAGATTCGGCGGGGAGTCCTAATGGTTCTTTGGAAATTGATATTGAGGACCAACCTGAAGGAGGTGCAAATGCATTAAACGTTAACAGCTTGAGGATGCTATTGCATAAGCCATCCACACCTCAATCATCCAATGCAATCCAACGAGTCCAGAGCACAGATGTCGATAATTCTCATTCTGCTCGGTCTTTCGTAAAGAAAGTTCTCGAGGAAAGTTTTCTAAAATTGAAGGAAGAGGACACCAGACATAGCAAATCTATCAGATGGGAGCTTGGGGCATGCTGGATACAACATTTGCAAAACCAAGCTACAGCAAAAACGGAGCCAAAAAAGGCCGAAGAAGCTAAACTTGAACCATCTGTAAAAGGTCTTGGAAAACAAGGTGGGCTACTAAaggaattgaagaaaaagattgacATCAGGAACTCTAAAGTAGAACAGggaaatgacattgacataaacAAGCCTGATGCTACTCAACAGGAATTTGAAAGACAATGTGAAGAAAAGGAAACTATATGGAGAAAACTGCTTTCTGATGCTGCATATTCACGCCTTAAAGAATCTAAAACTGATTTTCATCTAAAGTCACCTGATGAATTGATGGAGATGGCACATAAATATTATGATGATGTTGCACTTCCAAAGCTGGTGGCAGATTTTGGATCCCTTGAACTTTCACCTGTTGATGGGAGAACATTGACTGATTTCATGCATACCAGGGGCTTGCAGATGTCTTCCTTAGGACGAGTGGTTGATCTTGCCGATAAACTTCCTCACGTGCAATCACTTTGTATACATGAGATGGTTGTTCGAGCCTACAAGCATATCTTGCAAGCTGTTGTTGCAGCTGTTGATAATGATTCTGAATTGGCTTCATCTATAGCATCATGCTTAAATATATTGTTGGGAACTCCGTCATTTGAAACTAACGATGCTGATATTACTAGTTGTGATGTACTGAAATGGAAGTGGGTAGAAATCTTCCTTTTGAAGAGGTTTGGATGGAAGTGGAAGTATGAAATTAGTAAAGATTTAAGAAAGTTTGCCATTCTTCGTGGACTGTGCCATAAGGTTGGACTTGAGCTTGTTCCAAGGGACTATGATATGGATACAGCATCTCCTTTTAGAAAGTCAGATATTGTAAGCATGGTCCCCATATACAAGCATGTTGCTTGCTCATCTGCTGATGGCCGAACACTGTTGGAAtcatcaaagacttccttggaTAAAGGAAAATTGGAGGATTCTGTCAACTACGGCACCAAGGCACTTTCAAAGTTAGTAGCAGTGTGTGGGCCTTACCATAGAATGACCGCAGGAGCTTATAGTCTTTTGGCTGTTGTGCTATACCATACTGGTGATTTTAATCAGGCAACTATCTATCAGCAAAAAGCACTAGATATTAATGAGAGAGAGCTTGGACTGGACCATCCTGATACCATGAAAAGTTACGGGGATCTTGCTGTTTTCTATTACCGACTCCAACATACTGAGTTGGCTTTAAAgTATGTTAATCGTGCATTGTATCTTCTGCACCTAACTTGTGGACCTTCACATCCGAACACTGCTGCCACCTACATCAATGTAGCAATGATGGAAGAAGGATTGGGGAATGTCCATGTTGCCCTGAGATACCTTCATGAGGCTTTAAAATGTAACAAAAGATTACTTGGAGCTGATCATATACAGACGGCAGCCAGCTATCATGCAATAGCCATTGCTCTTTCTTTGATGGAAGCGTACTCTTTAAGCGTTCAGCATGAACAAACCACTCTCCAGATATTGCAGGCCAAACTTGGGTCTGATGATCTAAGGACTCAGGATGCAGCTGCTTGGCTTGAATATTTCGAGTCAAAGGCTCTCGAACAACAAGAAGCTGCTCGCAATGGTACACCTAAGCCAGATGCCTCAATCTCCAGCAAGGGTCATTTAAGCGTGTCAGACCTCTTGGATTACATAACACCAGATGCTGATTTGAAAGCAAGAGAAGCACAAAAAAAGGCTCGTGCCAAGTTGAAAGAAAAACCAGGCCAAAATTGGGATACAGCTACAGATGAAAGTCCCAAGGAGGAAGATGTGTCTCTAGATTATTCAATTACAGAGACTTCAAGcgataaagaaaataaatctgAAGCTCAATTTCAAGAACAAAAGATAGATAAAGTTGAGAGCACAAATTTAGACCAAACAATGCTCAATGAAGGCAATAAACTGGCAGAGAGTGACAACTCAGATGAAGGATGGCAGGAAGCAGTTCCTAAAGGTCGTTCGGTCATCGGGCGCAAGTCATCTTCATCAAGGAGACCTACCCTAGCAAAACTAAACACCAACTTCATCAATGTTTCTCAATCATCCAAATATCGAGGAAAACCCTCAAACTTTTCGTCTCCAAGATCAAATTTAAATGAGACTATTGCGGGGACCTCTCTTCCTGTTCCAAAAAAGTTTGTCAAGAGCACAAGCTTCAGTCCTAAGCTGAATGGCTCTAACACCCCTACCGCTGGAGTGGAGAAGGTAGCAGACACAAAGTCAGCTCCATCTAGCCCAGCTCTAAGCGATCAAAATGCTAAACCAGCTCCTGTTAATGGTGGCATCACTCTTCAGTCAACAAGTAAACTTTTTTCTTACAAAGAAGTTGCCTTAGCCCCACCTGGAACAATTGTCAAGGCTGTGGCTGAACAGGCACCGAAAGGAAATCCTAATGTTGAACAAGATTCTGAGGTGAGCCCCATAGTAATTGCAAAGGAGATCCATAATAATGTAGGAGCCCCAAATGGCATCGAAGAGAATGTTCAAAATTCAGTTGATAAGAACGCACAAGAATCTTCCCatggagaaaaaaaagaaaaggaagttGTTAAACTCCAGGAAGCGAACAATGATGTTGTTATAGAGAAGAATGTTGAAGTTGGAAACATCACAGCCATGGTGGTTGAGAAATCTGATTGTTCAAACAATACAACCAATGCTACCTCCAAAGATTCATCAGAGATAGAAGCACAAGCAACTTCCCTAACTGTTTCAGTTGAAAGTAAAATACACTTACACGACAATGATGTCTCTATATCAAAAGAGGTAGATATTGAAGGAGATGAGAAACAACTTGACTTTACCCAACCATCTGAAGGAGAAAAGCAAGAAGTAATAGAAAGTGGAAAAGAACAAACCAAGAAACTTTCAGCTGCTGCACCACCATTTAATCCAACCACAATTCCAATTTTTGGCTCTGTTCCAGTTCCAGTTCCAGGTTTCAATGATCATGTAGGGATTTTGCCCCCGCCGGTAAATATTTCACCTTTGCTTCCACGGAGATCTCTGCATCAGTCTGCAACAGCTAGGGTTCCATATGGTCCACGGATTTCTGGTGGCTATAATAGACATTATGGGAACCGTGTTCCACGAAATAAAACTATATTTCCATCAGGTGAGCACTCTAGCGATGGCAACCCGAATAGCCCTCCTACAATAATGAACCCACATGCCTCAGAGTTTGTACCTGGACAAATTTGGGTGACTCCTAATGGATATATAACTTCCCCAAATGGCATTCCGGTATCTCCTAATAGTTTCCCCTCAATCTCTCCCAATGATGGTATTTCTCCTGATTCACTAAGTGATATCCCAGTGAACCAAAATGAGTTTGCAACGTCTCCAAATAGTTCAGATGATTTAGCACAAGTTGAAAACaatcttcaaaatgaaaaagttCTCGATGAGCAAGTTACCGAAGCTTTGTCAACACAAGTCAGTTCTGAAAAGCAGCCAGTGGAGCAAAATCCTCAACCGGATCCACCTGTCAGCACTGAAAATTCTTGTCCTAAACTAGAAGAAAAGGATATAGTCCTTAACGACCCAACTGAGGTTGAAGTAGCCAACAAAGACACAGTAGATGAGGTAGAGTCAAGCAAATGTTGGGGAGATTACAGTGACAATGAAGCTGAATCAACTGAGGTTAAggaaagttaa 5349 0.4068 MAPKTGKTKPHKTKGEKKKKEEKVLPTVIEITVEIPDGSQVTLKGISTDRILDLRKLLAVHVETCHLTNFSLSHEVRGERLKDNVEIVSLKPCHVSIVQEDYYTEEVVVTHIRRLLDITACTSAFGKLPATGRGSVENGSPKPKTPNDQNLDLGGDVSMYPPPRLGQFYDFFSFSHLIPPFHYIRRSNRPFLEDKTEDDFFQIDVRVCSGKPTTIVASRKGFYPAGKRLLISHALVPLLQQISRVFDSAYKALMKAFTEHNKFGNLPYGFRANTWVVPPVVSDNPGVFPPLPMEDETWGGNGGGQGRDSKHEKRQWARDFAILAAMPCQNAEERQIRDRKAFLLHSLFVDVSVFKAVSAIKHFKDSKQSSISNNAPSSYEERIGDLTVKVIRDLSDASTKLDCKNDGTLVLELSEEELAQRNLLKGITADESAAVHDTPTLGAVIIRHCGYTAVVKVSPETDSAGSPNGSLEIDIEDQPEGGANALNVNSLRMLLHKPSTPQSSNAIQRVQSTDVDNSHSARSFVKKVLEESFLKLKEEDTRHSKSIRWELGACWIQHLQNQATAKTEPKKAEEAKLEPSVKGLGKQGGLLKELKKKIDIRNSKVEQGNDIDINKPDATQQEFERQCEEKETIWRKLLSDAAYSRLKESKTDFHLKSPDELMEMAHKYYDDVALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMSSLGRVVDLADKLPHVQSLCIHEMVVRAYKHILQAVVAAVDNDSELASSIASCLNILLGTPSFETNDADITSCDVLKWKWVEIFLLKRFGWKWKYEISKDLRKFAILRGLCHKVGLELVPRDYDMDTASPFRKSDIVSMVPIYKHVACSSADGRTLLESSKTSLDKGKLEDSVNYGTKALSKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNKRLLGADHIQTAASYHAIAIALSLMEAYSLSVQHEQTTLQILQAKLGSDDLRTQDAAAWLEYFESKALEQQEAARNGTPKPDASISSKGHLSVSDLLDYITPDADLKAREAQKKARAKLKEKPGQNWDTATDESPKEEDVSLDYSITETSSDKENKSEAQFQEQKIDKVESTNLDQTMLNEGNKLAESDNSDEGWQEAVPKGRSVIGRKSSSSRRPTLAKLNTNFINVSQSSKYRGKPSNFSSPRSNLNETIAGTSLPVPKKFVKSTSFSPKLNGSNTPTAGVEKVADTKSAPSSPALSDQNAKPAPVNGGITLQSTSKLFSYKEVALAPPGTIVKAVAEQAPKGNPNVEQDSEVSPIVIAKEIHNNVGAPNGIEENVQNSVDKNAQESSHGEKKEKEVVKLQEANNDVVIEKNVEVGNITAMVVEKSDCSNNTTNATSKDSSEIEAQATSLTVSVESKIHLHDNDVSISKEVDIEGDEKQLDFTQPSEGEKQEVIESGKEQTKKLSAAAPPFNPTTIPIFGSVPVPVPGFNDHVGILPPPVNISPLLPRRSLHQSATARVPYGPRISGGYNRHYGNRVPRNKTIFPSGEHSSDGNPNSPPTIMNPHASEFVPGQIWVTPNGYITSPNGIPVSPNSFPSISPNDGISPDSLSDIPVNQNEFATSPNSSDDLAQVENNLQNEKVLDEQVTEALSTQVSSEKQPVEQNPQPDPPVSTENSCPKLEEKDIVLNDPTEVEVANKDTVDEVESSKCWGDYSDNEAESTEVKES 1782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02768 1782 MobiDBLite consensus disorder prediction 1306 1324 - -
Tsu03g02768 1782 ProSiteProfiles Clueless (Clu) domain profile. 294 570 IPR025697 -
Tsu03g02768 1782 MobiDBLite consensus disorder prediction 1703 1782 - -
Tsu03g02768 1782 MobiDBLite consensus disorder prediction 1703 1718 - -
Tsu03g02768 1782 MobiDBLite consensus disorder prediction 1125 1155 - -
Tsu03g02768 1782 MobiDBLite consensus disorder prediction 1199 1324 - -
Tsu03g02768 1782 MobiDBLite consensus disorder prediction 132 153 - -
Tsu03g02768 1782 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 1672 IPR027523 GO:0006996
Tsu03g02768 1782 SMART tpr_5 942 975 IPR019734 GO:0005515
Tsu03g02768 1782 SMART tpr_5 984 1017 IPR019734 GO:0005515
Tsu03g02768 1782 SMART tpr_5 900 933 IPR019734 GO:0005515
Tsu03g02768 1782 MobiDBLite consensus disorder prediction 1600 1619 - -
Tsu03g02768 1782 ProSiteProfiles TPR repeat profile. 900 933 IPR019734 GO:0005515
Tsu03g02768 1782 Gene3D Tetratricopeptide repeat domain 854 1102 IPR011990 GO:0005515
Tsu03g02768 1782 MobiDBLite consensus disorder prediction 1578 1621 - -
Tsu03g02768 1782 CDD CLU-central 688 830 IPR033646 -
Tsu03g02768 1782 MobiDBLite consensus disorder prediction 1733 1782 - -
Tsu03g02768 1782 MobiDBLite consensus disorder prediction 1220 1268 - -
Tsu03g02768 1782 SUPERFAMILY TPR-like 900 1015 IPR011990 GO:0005515
Tsu03g02768 1782 MobiDBLite consensus disorder prediction 1275 1298 - -
Tsu03g02768 1782 MobiDBLite consensus disorder prediction 1 21 - -
Tsu03g02768 1782 Pfam Mitochondrial function, CLU-N-term 48 118 IPR028275 -
Tsu03g02768 1782 Pfam Translation initiation factor eIF3 subunit 135 686 829 IPR033646 -
Tsu03g02768 1782 MobiDBLite consensus disorder prediction 1648 1683 - -
Tsu03g02768 1782 PANTHER BNAA08G13880D PROTEIN 1 1672 - -
Tsu03g02768 1782 Pfam Tetratricopeptide repeat 899 969 - -
Tsu03g02768 1782 Pfam Tetratricopeptide repeat 983 1057 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02768 Tsu-Chr3 36985002 36999297 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02768 K03255 - gmx:100806823 2643.61