Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02725 ATGGTTACAACTACTGCAACATCTTCAATTTTTCCTGttacatcatcatcatctgatAATGGTGGAAAATCCTCCAAAAATGGAGGTAACTCATCTCTAAACATTGGAGGATTGAAATCTAAACAAAACTCTAATGGAATAAACATTAAGACAAATGCATCATCATCGAAAATCAATGGAACAACGGTGGTTACTGCTACGACTGCCACGCCTATTAAGGTTGAAAATGATTCGTCATTATCATCATCGTCGTCACAACATCACCCGAGGACATTCATTAATCAGTTGCCAGATTGGAGTATGCTTTTAGCTGCCGTAACTACCATCTTCCTTGCTGCTGAAAAGCAGTGGATGATGCTTGATTGGAAGCCAAGACGGTCTGATGATATGCTTGTTGATCCTTTTGGTATAGGAAAAATTGTTCAAGATGGTCTTGTTTTTCGCCAAAATTTTTCAATTCGGTCGTATGAAATAGGTGCTGATAAAACTGCGTCTATAGATACGTTAATGAATCATTTACAGGAAACTGCGCTTAATCATGTTAAGACTGCTGGGCTTCTTGGTGATGGATTTGGTTCAACGCCAGAAATGTGCAAAAAGAATCTGATATGGGTTGTAACTCGGATGCAGGTTGTGGTTGATCGTTATCCAACGTGGGGTGATGTTGTTCAAGTAGACACTTGGGTTTCTGCAACTGGAAAGAATGGTATGCGTCGTGATTGGCTTGTGCGTGACAGCAAAACAGGTGAAATCTTGACAAGAGCATCCAGTGTTTGGGTCATGATGAATAAACTGACTCGGAAACTATCTAAAATTCCAGAAGAAGTCAGAGGAGAGATAGAGCCTTATTTTGTTAATTCTGATCCAGTTGTGGATGAGGATAACAGAAAACTAACTAAACTTGATGATACAGCTGAATATATTCGCACTGGTTTAACTCCCAGATGGAGTGATCTAGATGTTAATCAGCATGTTAATAATGTCAAGTACATTGGGTGGATTCTGGAGAGTGCTCCACAGCCAATTTTGGAGAGTCATGAGTTGCATTCCATGACTTTGGAGTACAGGAGAGAGTGCGGACGAAACAGTGTACTTGAGTCTCTGACTGATGTCTCTGGTGCTGACATTGGAAATTTAGCCGACAGCGGATTTGTTGAATGCAAACACTTGCTTCGACTCAATGACGGTGCCGAGATTGTGAGGGGTAGGACTGAGTGGAGGCCAAAACCTGccatcaattttgatattttgaatcaGGCTCCATTACAAAACACATAA 1278 0.3975 MVTTTATSSIFPVTSSSSDNGGKSSKNGGNSSLNIGGLKSKQNSNGINIKTNASSSKINGTTVVTATTATPIKVENDSSLSSSSSQHHPRTFINQLPDWSMLLAAVTTIFLAAEKQWMMLDWKPRRSDDMLVDPFGIGKIVQDGLVFRQNFSIRSYEIGADKTASIDTLMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTRMQVVVDRYPTWGDVVQVDTWVSATGKNGMRRDWLVRDSKTGEILTRASSVWVMMNKLTRKLSKIPEEVRGEIEPYFVNSDPVVDEDNRKLTKLDDTAEYIRTGLTPRWSDLDVNQHVNNVKYIGWILESAPQPILESHELHSMTLEYRRECGRNSVLESLTDVSGADIGNLADSGFVECKHLLRLNDGAEIVRGRTEWRPKPAINFDILNQAPLQNT 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02725 425 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 305 406 IPR029069 -
Tsu03g02725 425 Gene3D Hotdog Thioesterase 137 413 - -
Tsu03g02725 425 CDD 4HBT 147 263 - -
Tsu03g02725 425 Pfam Acyl-ATP thioesterase 1 133 IPR021113 GO:0016790
Tsu03g02725 425 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 1 411 - -
Tsu03g02725 425 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 1 411 IPR045023 GO:0006633|GO:0016297
Tsu03g02725 425 Pfam Acyl-ACP thioesterase 144 407 IPR002864 GO:0006633|GO:0016790
Tsu03g02725 425 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 141 292 IPR029069 -
Tsu03g02725 425 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02725 Tsu-Chr3 35950358 35954414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02725 1 409 Acyl Lipid Metabolism Gene Families AT1G08510 76.642 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02725 K10781 - gmx:100170693 632.484