Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02722 ATGGCGCAAGAAAACAATGCTTTACACATCAATGCAACATTCAAGTTCATCTTCATCGTCATCATCTTCTTAACTACAATTTCAAGTTCATCTGCATGGATTGGTGTAAACTGGGGAACAATGACAACGCATCAACTTCCACCAAAGAAAATTGTGAAGATGCTTAAAGAAAACGGGTTTCAAAAATTGAAACTATTTGATGCTGATGATCGTATTATGACTGCTTTAATTGGTACTGATATTGAAGTTATGGTTGCAATTCCAAATATTATGTTGAATATCATTGGTAACAGTGATCTTACAGCTTCTGATTCTTgggtttttgaaaatgttacTGCTTACTTCTTCAGAGGTGGTGTCAATATCAAGTATGTTGCTGTTGGTAATGAGCCATTCCTTAAAGCATACAAGGGCACCTATCTAAATAAAACCCTTCCAGCTCTCAAGAATATACAAACTTCACTCAACAATGCAGGGTTGGGATCAAAGATCAAAGCTACTGTTCCATTCAATGCTGATATTTACTATTCACCAGATTCAAATCCAGTTCCATCAGCAGGTGATTTCAGACCTGAAATAAGAGACATCACTGTTGAAATAATCCAATTTCTATATTCAAACAATTCAACTTTCACAGTTAATATCTACCCTTTCCTTAGTCTTTACTATGGCAGTGATGTTTTCCCTTTCGATTTTGCATTTTTTGATGGAAAAAACAAATCTCTTAGAGATGGCAATGCTGTTTATAACAATGTTTTTGATGCAAATCTTGATACCCTTATGTGGGCTTTAGACAAAGCAGGTTATCCTGATATGCATGTTACAGTTGGTGAAGTTGGTTGGCCAACGGATGGCGATAAGAATGCTAATTCCGAAAATGCAAAAAGGTTCAACCAAGGTTTCATTAAACATGCTCTAAGTGGTAATGGTACACCGAAAAGAAAATGCATGATTGATTTTTATCTATTCAGTCTCATTGATGAAAATGCTAAAAGTGTTGCACCAGGTAATTTTGAGAGACATTGGGGGATTTTCGAGTTTGATGGAAAACCAAAATATGAATTAGACATAAAAGGTAAACATAAAGAAAAGGGTCTTATTGCTGTTGAAGGGATTAAGTACCTTGAAAAGAAGTGGTGTATTTTGGATCCAGAAGCTACTAATTTGGATGATGATTTAGCTAAAAGTGTTGACTATGCTTGTAGCCAATCTGATTGTACACCACTTGGCTATGGCTCTAGTTGTAATAATCTAAGTCTTGAAGGGAATGCTTCTTATGCTTTCAATATGTATTATCAAGTTAATAACCAGATGGATTGGGACTGTGATTTTTCTGGTTTGGCTATGGTTACGCGCGAGGATCCTTCTCAGAATGGCTGCCAATTCCCTTTGATGGTCGCTAGCGCTTCGCATTCAGGGCTTTCCCAGATCCTGCTGAAAGCAATGGAGATTTATGAGCAAGCTATGTCCATCCATGTAAATTTGTTTTCTGTATCTGATAATGGGAGGAATCCTATCCTATGGTAA 1527 0.3621 MAQENNALHINATFKFIFIVIIFLTTISSSSAWIGVNWGTMTTHQLPPKKIVKMLKENGFQKLKLFDADDRIMTALIGTDIEVMVAIPNIMLNIIGNSDLTASDSWVFENVTAYFFRGGVNIKYVAVGNEPFLKAYKGTYLNKTLPALKNIQTSLNNAGLGSKIKATVPFNADIYYSPDSNPVPSAGDFRPEIRDITVEIIQFLYSNNSTFTVNIYPFLSLYYGSDVFPFDFAFFDGKNKSLRDGNAVYNNVFDANLDTLMWALDKAGYPDMHVTVGEVGWPTDGDKNANSENAKRFNQGFIKHALSGNGTPKRKCMIDFYLFSLIDENAKSVAPGNFERHWGIFEFDGKPKYELDIKGKHKEKGLIAVEGIKYLEKKWCILDPEATNLDDDLAKSVDYACSQSDCTPLGYGSSCNNLSLEGNASYAFNMYYQVNNQMDWDCDFSGLAMVTREDPSQNGCQFPLMVASASHSGLSQILLKAMEIYEQAMSIHVNLFSVSDNGRNPILW 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02722 508 SMART X8_cls 378 462 IPR012946 -
Tsu03g02722 508 Gene3D Glycosidases 33 365 - -
Tsu03g02722 508 SUPERFAMILY (Trans)glycosidases 34 356 IPR017853 -
Tsu03g02722 508 Gene3D - 374 472 - -
Tsu03g02722 508 Pfam X8 domain 378 449 IPR012946 -
Tsu03g02722 508 PANTHER O-GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 17 470 - -
Tsu03g02722 508 Pfam Glycosyl hydrolases family 17 34 356 IPR000490 GO:0004553|GO:0005975
Tsu03g02722 508 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 17 470 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02722 Tsu-Chr3 35912986 35915748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02722 34 466 Miscellaneous Gene Families AT2G19440 57.506 2.06e-179 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02722 - - gmx:100781894 751.125