Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02514 ATGGCGAAGGAAGAGGGAAATCACACCGTCGTTTCCGATCTGATCAACTTCCTCAACGCATCTCCAACTGCTTTTCACGCCGTCGACGAAGCCAAGAAGCAGTTGAAAACCGCAGGGTACCAACAAATATCGGAGAAGGAAAATTGGGAACTCAAAGCTGGCCACAAATACTTCTTCACCAGAAACCATTCAACCATCGTTGCTTTCGCCATCGGCAAAAGATTTGTTGCCGGAAATGGATTCTACATAGTTGGTGCTCACACCGATAGTCCTTGTTTGAAACTGAAGCCGGTGTCGAAGGTGGTTAAGGGTGGAATATTGGAGGTTGGTGTTCAAACCTATGGAGGAGGTTTATGGCACACGTGGTTTGATCGTGATTTGACGGTGGCTGGGAGGGTTATATTACGAAAAGAAATTGCAGGTTCTGTTTCGTACTCGCATCGCCTTGTTAGACTTGAGGAACCTATAATGCGTGTCCCAACTTTGGCAATTCACTTAGACagAGGTGTTAATGATGGATTCAAAGTAAACACTCAGACTCATCTTCTTCCCATCCTTGCCACATCTCTAAAGGCAGAGGCTAATAAAGTGTCCTATGAAAACGATTCAGTTGAaagtggaaagaaagaaaatgataaaacaGGCTCTAGCAATGCGAAGCACCACCCTATACTTTTACAGTTGCTTGCAAGTAAGCTTGAGTGTGAACCAGATGACATTTGTGATTTTGAATTGCAAGCTTGTGATACACAACCAAGCATAGTTGCTGGAGCTGCCAAGGAGTTCGTATTTTCGGGACGGCTTGATAACCTCTGCATGTCATTTTGTTCTTTGAAGGCATTAATAGATGCTACATCCTCCGACAGCAGTCTTGAGGAAGAGCCTGGCATTAGAATGGTGGCTTTGTTTGACCATGAGGAATGTGGGTCTAACTCTGCTCAAGGAGCTGGCTCTCCTGTAGTGCTAGATGCTATGTCTAGGATTACAGATTTCTTCAGCCCAAATTCGAAgcTTCTTGAGAAAGCAGTACAAAGAAGCTTTCTTGTATCTGCTGATATGGCACATGCACTACACCCGAATTACATGGACAGGCATGAAGAAAACCATCAACCTAAACTACATGGAGGACTTGTCATTAAGCAAAATGCAAACCAACGCTATGCAACCAATGCTGTCACATCCTTCATTTTTAGGGAGATAGCATCAAAACATAATCTTCCCATTCAGGACTTTGTGGTGCGCAATGACATGGCATGTGGTTCAACAATAGGTCCTATCCTTGCGAGTGGCATTGGTATTCGAACTGTTGATGTTGGTGCACCGCAGTTGTCAATGCATAGCATCCGAGAAATGTGCGCTGTTGATGATGTGAAATATTCATATGAACATTTCAAGGCCTTTTTTCAGGAATTCTTTCATCTAGATGCTAATATAGTTGTGGACATATAA 1449 0.4272 MAKEEGNHTVVSDLINFLNASPTAFHAVDEAKKQLKTAGYQQISEKENWELKAGHKYFFTRNHSTIVAFAIGKRFVAGNGFYIVGAHTDSPCLKLKPVSKVVKGGILEVGVQTYGGGLWHTWFDRDLTVAGRVILRKEIAGSVSYSHRLVRLEEPIMRVPTLAIHLDRGVNDGFKVNTQTHLLPILATSLKAEANKVSYENDSVESGKKENDKTGSSNAKHHPILLQLLASKLECEPDDICDFELQACDTQPSIVAGAAKEFVFSGRLDNLCMSFCSLKALIDATSSDSSLEEEPGIRMVALFDHEECGSNSAQGAGSPVVLDAMSRITDFFSPNSKLLEKAVQRSFLVSADMAHALHPNYMDRHEENHQPKLHGGLVIKQNANQRYATNAVTSFIFREIASKHNLPIQDFVVRNDMACGSTIGPILASGIGIRTVDVGAPQLSMHSIREMCAVDDVKYSYEHFKAFFQEFFHLDANIVVDI 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02514 482 SUPERFAMILY Zn-dependent exopeptidases 9 469 - -
Tsu03g02514 482 PANTHER ASPARTYL AMINOPEPTIDASE 5 481 IPR001948 GO:0004177|GO:0006508|GO:0008270
Tsu03g02514 482 Pfam Aminopeptidase I zinc metalloprotease (M18) 17 468 IPR001948 GO:0004177|GO:0006508|GO:0008270
Tsu03g02514 482 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 153 170 IPR001948 GO:0004177|GO:0006508|GO:0008270
Tsu03g02514 482 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 81 97 IPR001948 GO:0004177|GO:0006508|GO:0008270
Tsu03g02514 482 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 114 134 IPR001948 GO:0004177|GO:0006508|GO:0008270
Tsu03g02514 482 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 435 450 IPR001948 GO:0004177|GO:0006508|GO:0008270
Tsu03g02514 482 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 303 321 IPR001948 GO:0004177|GO:0006508|GO:0008270
Tsu03g02514 482 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 346 362 IPR001948 GO:0004177|GO:0006508|GO:0008270
Tsu03g02514 482 Gene3D Aminopeptidase i, Domain 2 91 251 IPR023358 GO:0004177
Tsu03g02514 482 Gene3D Zn peptidases 14 467 - -
Tsu03g02514 482 CDD M18_DAP 13 469 - -
Tsu03g02514 482 SUPERFAMILY Aminopeptidase/glucanase lid domain 93 246 - -
Tsu03g02514 482 PANTHER ASPARTYL AMINOPEPTIDASE 5 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02514 Tsu-Chr3 29843994 29851992 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02514 K01267 - gmx:100781379 818.15