Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02353 ATGGCGTCAATGGCTTCGATCGGTGTTCTCAAAGTACCTTCATCCTCATCCTCAccctcttcttcatcatcatccaaaGCCATTGCACGCAACCTCTCATTCAATTCATCACAGCTCTGTGGTGATAAGATTAACACAATCTCAGCAAGACTAAGAGGAATCTATGGCTGCAGTCCCTTCATTGTTTCTCCCAAGGCTGTTTCTGATTCCAAAAACTCTCAAACTTGTCTTGATCCAGATGCTAGCAGAAGTGTACTTGGAATTATTCTCGGAGGGGGTGCCGGGACACGTCTTTATCCACTGACGAAGAAGCGAGCAAAACCAGCTGTTCCTCTTGGGGCAAACTACAGGCTGATTGATATCCCTGTAAGCAACTGTCTAAATAGCAACATATCAAAGATCTATGTCCTTACACAATTCAATTCAGCATCCTTGAATAGGCACTTGTCACGTGCATATGCGAGCAACATGGGTGGCTACAAAAATGAAGGTTTTGTTGAGGTTCTCGCCGCACAGCAGAGTCCTGAGAATCCGAATTGGTTCCAGGGCACTGCAGATGCAGTGAGGCAATACTTATGGCTTTTCGAGGAGCACAATGTTTTGGAATACTTAGTTCTAGCTGGTGACCATTTGTATCGAATGGATTATGAGAGATTTATACAAGCACACAGGGAAAGTGATGCTGATATCACTGTTGCTGCACTGCCAATGGATGAAGCGCGTGCCACTGCATTTGGTCTAATGAAGATTGATGAAGAGGGGCGTATAATTGAATTTGCTGAGAAGCCAAAAGGAGAACAGTTGAAAGCTATGAAAGTTGATACTACGATTTTGGGTCTTGATGATGAGAGAGCAAAGGAAATGCCTTATATTGCTAGCATGGGTATATATGTTGTCAGCAAAAATGTGATGCTAGATCTGCTCCGCGACAAGTTTCCTGGTGCCAACGACTTTGGAAGTGAAGTTATTCCCGGTGCAACTGAACTTGGACTGAGAGTGCAAGCTTATTTATACGATGGATACTGGGAAGACATTGGTACAATTGAGGCGTTCTATAATGCAAATCTGGGAATCACCAAAAAGCCAGTGCCAGATTTTAGTTTCTACGATCGTTCATCTCCAATCTACACCCAGCCTCGGTATTTGCCTCCATCTAAGATGCTTGATGCTGATATCACCGATAGTGTTATTGGCGAAGGATGTGTAATTAAGAACTGCAAAATTCACCATTCTGTAGTTGGACTGCGATCTTGCATATCAGAAGGTGCAATCATTGAGGACACATTGTTAATGGGGGCAGATTATTATGAGACGGATGCTGATAGGAGGTTTTTGGCTGCTAAAGGCAGCGTTCCGATTGGTATTGGCAAGAATTCTCATATCAGAAGGGCAATTATCGACAAGAATGCTAGAATTGGAGACGACGTGAAGATCATTAACAGTGACAATGTGCAAGAAGCTGCAAGAGAAACCGATGGTTATTTCATAAAAAGTGGGATCGTCACAGTGATCAAGGATGCATTAATTCCAAGTGGAACTGTCATCTAA 1548 0.4257 MASMASIGVLKVPSSSSSPSSSSSSKAIARNLSFNSSQLCGDKINTISARLRGIYGCSPFIVSPKAVSDSKNSQTCLDPDASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEYLVLAGDHLYRMDYERFIQAHRESDADITVAALPMDEARATAFGLMKIDEEGRIIEFAEKPKGEQLKAMKVDTTILGLDDERAKEMPYIASMGIYVVSKNVMLDLLRDKFPGANDFGSEVIPGATELGLRVQAYLYDGYWEDIGTIEAFYNANLGITKKPVPDFSFYDRSSPIYTQPRYLPPSKMLDADITDSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIRRAIIDKNARIGDDVKIINSDNVQEAARETDGYFIKSGIVTVIKDALIPSGTVI 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02353 515 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 65 380 IPR029044 -
Tsu03g02353 515 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 3 515 IPR011831 GO:0005978|GO:0008878
Tsu03g02353 515 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 91 110 IPR005836 GO:0005978|GO:0008878
Tsu03g02353 515 MobiDBLite consensus disorder prediction 9 23 - -
Tsu03g02353 515 SUPERFAMILY Nucleotide-diphospho-sugar transferases 84 405 IPR029044 -
Tsu03g02353 515 Pfam Nucleotidyl transferase 87 360 IPR005835 GO:0009058|GO:0016779
Tsu03g02353 515 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 180 188 IPR005836 GO:0005978|GO:0008878
Tsu03g02353 515 MobiDBLite consensus disorder prediction 1 23 - -
Tsu03g02353 515 Gene3D Hexapeptide repeat proteins 381 515 - -
Tsu03g02353 515 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE 3 515 - -
Tsu03g02353 515 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 85 479 IPR011831 GO:0005978|GO:0008878
Tsu03g02353 515 SUPERFAMILY Trimeric LpxA-like enzymes 378 515 IPR011004 -
Tsu03g02353 515 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 292 302 IPR005836 GO:0005978|GO:0008878
Tsu03g02353 515 CDD ADP_Glucose_PP 96 345 - -
Tsu03g02353 515 CDD LbH_G1P_AT_C 383 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02353 Tsu-Chr3 26632986 26636785 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02353 K00975 - gmx:100799431 931.398