Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02350 ATGGCTTCAAGTGAAAGCGGCGACGGGAAACACAACCCAGCGTTTGACCCGGATTTGGATATTCCGGACAACCCGGATCACGAGTTTGCTGAATTCGGTGCGGGTTGTTTCTGGAGTGTGGAGCTTGCTTTTCAACGACTTGTGGGAGTTGTGAAGACTGAGGTTGGATATACACAAGGTCATACACCAGATCCTAATTATAAATTGGTCTGCACCGGAACTACTAACCATGTCGAAGTGGTTCGGGTTCAATTTGATCCGAAAGTTTGTTCCTACACAAATCTATTGACTCTGTTTTGGTCAAAACATGACCCTACTACCCTCAATCGTCAGGGAGGTGATGTGGGTGCACAATATAGATCAGGAATATACTATTACAATGAAACTCAAGCTCGTTTAGCGCAAGAATCAAAAGAAGCTAAACAGTTGGAAAAGAAGGATAAGATTGTAACTGAAATACTTCCAGCAAAGAGATTTTATAGAGCAGAGGAATATCATCAGCAATATTTGGAGAAGGGTGGAGGCAAAGGCCTCGGTCAGTCTGCAGAAAAGGGCTGCACCGATCCCATAAGGTGCTATGGTTGA 585 0.4427 MASSESGDGKHNPAFDPDLDIPDNPDHEFAEFGAGCFWSVELAFQRLVGVVKTEVGYTQGHTPDPNYKLVCTGTTNHVEVVRVQFDPKVCSYTNLLTLFWSKHDPTTLNRQGGDVGAQYRSGIYYYNETQARLAQESKEAKQLEKKDKIVTEILPAKRFYRAEEYHQQYLEKGGGKGLGQSAEKGCTDPIRCYG 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02350 194 PANTHER PEPTIDE METHIONINE SULFOXIDE REDUCTASE FAMILY PROTEIN 9 194 - -
Tsu03g02350 194 Hamap Peptide methionine sulfoxide reductase MsrA [msrA]. 27 184 IPR002569 GO:0008113
Tsu03g02350 194 SUPERFAMILY Peptide methionine sulfoxide reductase 23 175 IPR036509 GO:0008113
Tsu03g02350 194 Gene3D Peptide methionine sulphoxide reductase MsrA 18 194 IPR036509 GO:0008113
Tsu03g02350 194 Coils Coil 126 146 - -
Tsu03g02350 194 MobiDBLite consensus disorder prediction 1 22 - -
Tsu03g02350 194 TIGRFAM msrA: peptide-methionine (S)-S-oxide reductase 29 172 IPR002569 GO:0008113
Tsu03g02350 194 Pfam Peptide methionine sulfoxide reductase 31 173 IPR002569 GO:0008113
Tsu03g02350 194 PANTHER MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASE 9 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02350 Tsu-Chr3 26606580 26609000 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02350 K07304 - gmx:100527085 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02350 03 26606580 26609000 Tsu03g02350 03 26606580 26609000 ECH