Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02336 ATGGCTAGTACTAATCCTCGCCAGTTACAAGCTAACAAAATGCAGCTAAAGAAGGAGAGACGCATGTTCTCTACTTCTGATGATAGTGCCATGATGAAACAAGTTCAATCCACTCATGCACCTGATGGTCGTGAAATTGATGTCAAACCCCTTATTCAAATTGTTGATGAAATCTTGATTCAAATCATTGCAAGAAGTGTCGAGGGTCATCAACATGATCATGTTAAACATGAGCAAGAGAAATTGGAAACTGCTGCTGCTTTGGCTGAATTTGATATGCTTGATGCATTGGCTTTTATCATTAACAAAATTTCGTGTGAGCTATCATGCAAATGCTCAGGAGGTGGAGATGCACATGCATCAACAATGGTGTTACTAAATTACCTATCTAGCTATTCATGGCATGCAAAAGTTGTGTTAACCTTAGCAGCATTTGCTGttatttttggagaattttgGCTTGTTGCTCAATCAAGTGTTTCAAACACACTTGCCAAATCTGTGGCACTCCTTAAGCAATTACCTGACATAGTAGAGAATTCTGTTTCATTAAGACCACAATTTGATGCACTCAATAAGCTTGTGAAGGCTGCACTTGATGTTACTATGTGCATTGTTGAATTCAAAGAGTTACCATCTGAATATATTTCAGAAGATGTTCCTCCTATGTCTGTTGCAAGTGCTCATATTCCTATTGCTACCTATTGGGTCATTAGAAGTATTGTTGCTTGTGCCTCACAAATTGCTAGTCTCATAGGCATGAGAAATGAGGCCATTTCATCTGCCTCAGAAGCATGGGAATTATCTAGTCTGGCTCACAAAGTTACTAGTATATATGAGCACCTCAAGAACCAACTTGCTATTTGCTATCAATATATAGATGAAAAGAGGCATATTGAGGCATTTCACAATCTGATACGTCTTTTCGAGACGATTCATGTAGACAACATGAAAATTCTGAGAGCATTGATTTATGCAAAGGATGATATTCCTCCACTTATAGATGGAACTACAAAATTAAGGGTTAGTCTTGAGGTACTAAGAAGGAAACATGTGTTACTTCTGATATCAGATCTTGATATTTCACTAGAAGAAATTATGATACTTGATAATTTGTACAAAGATGCAAGATCTAGGGGTGAGACACACTATGAGATGGTATGGATTCCAGTTGTGGACAAAGCAACATGGAATGAAGTGAATAAGCAAAAGTTTGAGTATCTTCAATCATCAATGCCGTGGCACAGTGTTCGCGATCCTTTCATTATTGAGCCATCAGTGATTAAGTATATAAAAGAAGTGTGGAATTACACAAAAAGAGCTATTCTAGTTGCTCTTGATCCACAAGGCAGATTGTCCTCCCAAAATGCTCTTCACATGATATGGATTTGGGGAAATTTGGCCTTCCCTTTTacaagtgaaaaagaagaatcaTTGTGGAAGCAAGAGATTTGGAGCCTCGAGCTTCTTGTTGATGGCATTGATCCCGCACTTTTGGACTGGATGACAGAAGGAAAAATCATATGTCTATATGGAGGCGAAGATCTAGAGTGGATAGAAACATTCACAAAAACAGCAATGAATGTAGCAAGAACTAGCAACTTCGATTTAGAAATGGTATACGTAGGAAAAAGCAATGCAAAAGAGAGAATGCAGAGGATGATAACCACcttcaacaataaaaaattcagTTACTTTTTTCCAAACGTGACATCGATTTGGTTCTTTTGGGCAAGACTCGAGAGCATGTTGTACTCAAAATTACAACATGGAAAGACGGTTGAAAACGATAAGATCATGAGTGAAGTTATGACAGTACTAAGCTTCGATGGTAGTGATCGAGGCTGGGCAATATTCTGTAGAGGTCCATCTGAAATGGCTAGAGCTAAAGGTGATACTGCTTTAACAAGTTTGAGAGATTTTGATAAATGGAAACATAAGATTGAACAAGATGGTTGGGTTCCTGCATTGAATGATTATATTAAGGAAATTCAGCAACCACATCATTGTAATAGGCTTATTCTTCCTGGGAGTACCGGTGGAATTCCGCAGAAAGTTGTTTGTGCTGAATGTGGGCGCCAAATGGAGAAATATTTCATGTATCGTTGCTGCGTCGAGTGA 2121 0.3753 MASTNPRQLQANKMQLKKERRMFSTSDDSAMMKQVQSTHAPDGREIDVKPLIQIVDEILIQIIARSVEGHQHDHVKHEQEKLETAAALAEFDMLDALAFIINKISCELSCKCSGGGDAHASTMVLLNYLSSYSWHAKVVLTLAAFAVIFGEFWLVAQSSVSNTLAKSVALLKQLPDIVENSVSLRPQFDALNKLVKAALDVTMCIVEFKELPSEYISEDVPPMSVASAHIPIATYWVIRSIVACASQIASLIGMRNEAISSASEAWELSSLAHKVTSIYEHLKNQLAICYQYIDEKRHIEAFHNLIRLFETIHVDNMKILRALIYAKDDIPPLIDGTTKLRVSLEVLRRKHVLLLISDLDISLEEIMILDNLYKDARSRGETHYEMVWIPVVDKATWNEVNKQKFEYLQSSMPWHSVRDPFIIEPSVIKYIKEVWNYTKRAILVALDPQGRLSSQNALHMIWIWGNLAFPFTSEKEESLWKQEIWSLELLVDGIDPALLDWMTEGKIICLYGGEDLEWIETFTKTAMNVARTSNFDLEMVYVGKSNAKERMQRMITTFNNKKFSYFFPNVTSIWFFWARLESMLYSKLQHGKTVENDKIMSEVMTVLSFDGSDRGWAIFCRGPSEMARAKGDTALTSLRDFDKWKHKIEQDGWVPALNDYIKEIQQPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02336 706 Pfam Sieve element occlusion C-terminus 475 704 IPR027944 -
Tsu03g02336 706 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 10 705 IPR039299 GO:0010088
Tsu03g02336 706 Pfam Sieve element occlusion N-terminus 26 313 IPR027942 -
Tsu03g02336 706 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 10 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02336 Tsu-Chr3 26407572 26412370 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02336 - - gmx:100811452 1179.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02336 03 26407572 26412370 Tsu03g02336 03 26407572 26412370 ECH