Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02329 ATGACTATTACTGTCGTGCCTACGATCAAGGACGACTGCCTTATGATCAGAGGCAACGTCATTCTTACAAGTGTCCCTGAAAACATCGTTGTTTCTCCTGTTTCAACGGCCTCCGCTTTTTTAGGTGCAACTTCTTTAATTCCAAGTTCCCGTCACGTTTTCACTCTCGGCACTCTCCGgGGATATAGATTGTTATCTTTATTTAGAGTGAAAATATGGTGGATGATACCACGTGTAGGGACATCGGCAAGCGATGTTCCAATGGAAACTCAATTGCTGCTACTGGAAGCAAGAGAAGAGTCTGCTCTTAAGGAAGATTTTTCTTCTGATACTGAAGAGCCAGAAGAAGTGAATACTTCCTACATTCTCTTCTTGCCTGTATTGGATGGAGCATTCCGCGCAACTTTGCAAGGAACTGCATTAAACGAGCTCCAATTCTGCGTTGAAAGTGGAGATGCCTACGTTCAAACTTCTCAATCACTCGAGGCAGTATTTGTAAATTCTGGAGACAATCCATTTGAGCTAATAAGGGATTCTATCAAGATATTGGAGAAACATAGCGGAACGTTCTGTCATCTTGAAAACAAGGAGATTCCTGTACACCTTGATTGGTTTGGATGGTGTACTTGGGATGCCTTTTACACTCAAGTAAATCCACAAGGAATAAAAGAGGGAATTCAAAGTCTCTCAAGTGGAGGTTTTACACCAAAGTTTATCATAGTTGATGATGGATGGCAAGAGACTCTCAATGAGTTTTACAAAGAAGGCGAACCAATAATCGAAGGAACCCAgTTTGCTACAAGACTGATAGACATCAAGGAAAATGTTAAGTTCAGAAGTGCAGGTTCCAACAATTCTTGCATCAATCTCCATGATTTCGTACACTCTATCAAACAGAATTTGAGTGTAAAATACGTTTACATGTGGCATGCGTTAGCTGGTTATTGGGGAGGAGTACTTGCGTCTTCGGATGCAATGAAGAAATATAATCCAAAGCTTGTATATCCAATTCAGTCACCTAGTAACACAGGGAACCTTAGAGATATAGCCATGGATAGCTTGGAAAAATATGGAGTTGGAATCATAGACCCATCAAAGCTATATGACTTTTACAATGACTATCACAGTTATCTTGCTAGCTGCGGCGTCGATGGAGTCAAAGTAGATGTCCAAAATTTGATAGAAACTTTGGGTTCTGGGTACGGTGGGCGTGTTTCATTGACTAAACGGTATCAAGAAGCATTAGAGACATCAATAGCTAGGAACTTCAAGGATAATAATCTCATTTGCTGCATGGCTCATAACTCTGATTCAATTTACAGTTCAAAGAAGAGTGCAGTAacaagagcatctgaggatttCATGCCAAGGGAACCAACATTTCAAACCTTGCACATTGCGTCAGTAGCTTTTAACAGTCTTCTTCTAGGGGAGATATTTGTGCCAGACTGGGACATGTTCCAAAGCAAGCACGAGACAGCTGAGTTCCATGCTGCAGCAAGAGCAATCGGTGGTTGTGCAGTATATGTTAGTGATAAGCCTAGGAGTCATGATTTTAAAATCCTAAGGAAGCTAGTACTACCTAATGGATCAGTCTTGCGGGCAAGATATGCTGGCCGTCCTACTCGAGATTGTTTATTTCAAGATCCTGTAATGGATGGTAAAAGTCTGCTGAAAATTTGGAACTTAAATAAGCTGACCGGGGTGATAGGTGTCTTTAATTGCCAAGGAGCAGGAAGCTGGCCAATGAAACCATCGGAAGCCACACCGACACGTTTAACCATTTCAGGAAAAATTAGACCAATTGATGTTGAATTTCTTGAAGAGGTTGCAGGTGAAAATTGGAATGGAGACTGCATATTATATGCCTTCAATGCAGGCTTGCTTTCCAAGCTACCAAGTAGAGGAAAACTAGAAGTGTCCTTGGAGACTCTTCAATGTGAAGTATATACAGTATCTCCAATTAGGGTATTTGGTCATGATGTGCAATTTGCACCAATTGGATTGCTTGACATGTACAATTCAGGAGGAGCTGTAGAAGAACTATCCTGCACAATGAATGTTGCAAATTGCATAATAAAAATCAGAGGTAGAGGATATGGCCGTTTTGGAGCCTACTCCAATGTTAGACCGCAGCGTTGCTTGGCGGACAAGAACGAGGAGGAGTTTTCCTACAACTCTGAAGATGGATTATTGACAATTAATCTTGATGGTGACGGAAATTCGAGGGACATAGAATTTTGTAGTAATGAAATTGGAACTGATCTAAATTTACATACTCACTTCTCGTCGTCTAGATCTCTCTCTCACGCTTCCTCTGCTTCACCTTCTTCCATCTCTTCTTTTGGATCTATCTCTCTCTTACGCTTCCTCTGCTTCACCTTCTTCCATCTCTTCTATCGATCTCTCGCCGCTGCACTGCCGTCACTCCTCTCTCCATTAACCAACGCAGGAGCAGCAAGAAGAAAATCCAGGATTAGCAAAATTTCAACAATGGCCGGAATCCAATCACCACCACACACCACCGATGTTGACGGTTTAATTGTTACCATGAATCACATGAGAAGTTGTGAAGAGATGACGATGGAATCTGTTGGTTCTCCTAAACCTCACAGATTTGGTCATATGAACAACAACCATATCAGACCCTTTAAGCCACAATTTATTAGCAGCCCAGCTAGAGATTGA 2688 0.4126 MTITVVPTIKDDCLMIRGNVILTSVPENIVVSPVSTASAFLGATSLIPSSRHVFTLGTLRGYRLLSLFRVKIWWMIPRVGTSASDVPMETQLLLLEAREESALKEDFSSDTEEPEEVNTSYILFLPVLDGAFRATLQGTALNELQFCVESGDAYVQTSQSLEAVFVNSGDNPFELIRDSIKILEKHSGTFCHLENKEIPVHLDWFGWCTWDAFYTQVNPQGIKEGIQSLSSGGFTPKFIIVDDGWQETLNEFYKEGEPIIEGTQFATRLIDIKENVKFRSAGSNNSCINLHDFVHSIKQNLSVKYVYMWHALAGYWGGVLASSDAMKKYNPKLVYPIQSPSNTGNLRDIAMDSLEKYGVGIIDPSKLYDFYNDYHSYLASCGVDGVKVDVQNLIETLGSGYGGRVSLTKRYQEALETSIARNFKDNNLICCMAHNSDSIYSSKKSAVTRASEDFMPREPTFQTLHIASVAFNSLLLGEIFVPDWDMFQSKHETAEFHAAARAIGGCAVYVSDKPRSHDFKILRKLVLPNGSVLRARYAGRPTRDCLFQDPVMDGKSLLKIWNLNKLTGVIGVFNCQGAGSWPMKPSEATPTRLTISGKIRPIDVEFLEEVAGENWNGDCILYAFNAGLLSKLPSRGKLEVSLETLQCEVYTVSPIRVFGHDVQFAPIGLLDMYNSGGAVEELSCTMNVANCIIKIRGRGYGRFGAYSNVRPQRCLADKNEEEFSYNSEDGLLTINLDGDGNSRDIEFCSNEIGTDLNLHTHFSSSRSLSHASSASPSSISSFGSISLLRFLCFTFFHLFYRSLAAALPSLLSPLTNAGAARRKSRISKISTMAGIQSPPHTTDVDGLIVTMNHMRSCEEMTMESVGSPKPHRFGHMNNNHIRPFKPQFISSPARD 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02329 895 Gene3D Aldolase class I 203 529 IPR013785 -
Tsu03g02329 895 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 1 747 - -
Tsu03g02329 895 SUPERFAMILY (Trans)glycosidases 201 533 IPR017853 -
Tsu03g02329 895 PANTHER - 1 747 IPR008811 -
Tsu03g02329 895 Pfam Raffinose synthase or seed imbibition protein Sip1 9 735 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02329 Tsu-Chr3 26321404 26326433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02329 1 736 Glycoside Hydrolase AT1G55740 48.069 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02329 - - gmx:100816978 1288.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02329 03 26321404 26326433 Tsu03g02329 03 26321404 26326433 ECH