Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02328 ATGAAAAACATGTTTCTGTCTTGCTTTAAAACCATGATTATTATCCTGTTCATCTTGGTTTGTGTTGGATTAAGCAATGGTGCCAATCAAAAAATCCCCCTCCAAGGAAGAAAAGGGCAGTGGCATCTGCTTCTCAACAACACAGGTGTAGTTGGTATGCATATGGCATTAACCTACGAAAACACTGTCATAATGTTCGATCAAACTGAAGCAGGCCAATCTAGTTACAAACTTCGTAAACGCTTCAATGGAACCATGTGTACAAGAAACCAACACGATTTAACCGATTCAACGTGTTTTGCTCATTCAGTAGAGTATGATATCAGTTCCAATAGAATAAGACCTTTGAGGCTAGACACTGATCCTTGGTGTTCCTCTGGCTCTTTCCTAAGCAATGGAACACTTCTACAAACAGGTGGATATCATCAAGGTGCTAAAAGGGTTAGATACTATAGACCTTGTGGTGGGAATCATCACCAATGTGATTGGATACAATCAAAGAAATATCTATCTAATGAAAGGTGGTATGCTTCTAGTCAGATTCTACCAGAACACGACAGAGTTGTTCTTGTTGGTGGAAAAAGAGTTTTCACATATGAATTTGTACCGAAAATTAGTCCTAATGAAAAATCTTTCAACCTTCCATTTCTGCACCAAACCTATGACAGGAATTCAGATGGGAACAATTTATATCCATTCATTCACCTTTCATCGGACGGAAACTTGTTCATTTTTGCCAACCGTGATTCCATCTTACTCAACTTGAGACGCAATAGAGTAATCAAGACGTTCCCTCGGATTCCAGGAAATGGGTCAAGAAACTACCCGAGTTCTGGCTCATCCGTGTTACTACCGTTAGACCATAAAGACAATTTCAAGAAAGTTGAAGTTATGGTATGTGGAGGTTCTGCTACAGGAGCACTCAATGCTGCTAGAAGAAAAAGATTCATTGAAGGTTTAAGATCTTGTGGGAGAATGGTGATCACAGGGAATAAACACATTTGGGAAATGGATTACATGCCGAAACCGCGTTTTTTACACGACATGATAATTCTACCTACAGGGAACATCTTGATTATAAATGGTGCTAAACATGGTTGTGCAGGATATGATAATGCTAGAAATGCTTCACTTGAACCTTATCTTTATAGTCCAAAAAAAAGACTAGGAAAAAGGTTCAGTGTTCTTGAGAAAACAATGATAGCAAGAGTGTATCATTCGTCAGCAACTCTTCTTCCTGATGGTAGAGTATTAGTAGCTGGTAGTAACCCACATGAGACATACACTTTTCACAATGTAGCATATCCAACTGAACTAAGACTTCAAGCATTTGTTCCACATTACATGGAAAAGAGGTATCATACTTGGAGGCCAAGTAACTTGACCATAGAAAAGCATGCAATTGGGTATGGTAAAGAGTTTAATGTGTCGTTTTTGTTGGGAAAGAAGCCGAGCGATGATGTGAGGTTCAATGTTTATTCACCGCCGTTTACTACTCATGCATTTGCCATGAATCAGAGGATGTTGATTCTGAGATGCAAGAGGATGGTGAGAAGTAGTAAGGGGTGGGTGCATGCAGTATTGGAAGCTCCGCCATCATCGGTTGTTGCACCTTCTGGTTATTACTTGCTCACAGTGGTGAATGGAGGAATTCCAAGTTTGTCTAAGTGGATTCGGTTTGCACACGCTTAG 1692 0.3983 MKNMFLSCFKTMIIILFILVCVGLSNGANQKIPLQGRKGQWHLLLNNTGVVGMHMALTYENTVIMFDQTEAGQSSYKLRKRFNGTMCTRNQHDLTDSTCFAHSVEYDISSNRIRPLRLDTDPWCSSGSFLSNGTLLQTGGYHQGAKRVRYYRPCGGNHHQCDWIQSKKYLSNERWYASSQILPEHDRVVLVGGKRVFTYEFVPKISPNEKSFNLPFLHQTYDRNSDGNNLYPFIHLSSDGNLFIFANRDSILLNLRRNRVIKTFPRIPGNGSRNYPSSGSSVLLPLDHKDNFKKVEVMVCGGSATGALNAARRKRFIEGLRSCGRMVITGNKHIWEMDYMPKPRFLHDMIILPTGNILIINGAKHGCAGYDNARNASLEPYLYSPKKRLGKRFSVLEKTMIARVYHSSATLLPDGRVLVAGSNPHETYTFHNVAYPTELRLQAFVPHYMEKRYHTWRPSNLTIEKHAIGYGKEFNVSFLLGKKPSDDVRFNVYSPPFTTHAFAMNQRMLILRCKRMVRSSKGWVHAVLEAPPSSVVAPSGYYLLTVVNGGIPSLSKWIRFAHA 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02328 563 SUPERFAMILY Galactose oxidase, central domain 103 450 IPR011043 -
Tsu03g02328 563 PANTHER SECRETED PROTEIN-RELATED 6 562 - -
Tsu03g02328 563 CDD E_set_GO_C 457 559 IPR015202 -
Tsu03g02328 563 Pfam Galactose oxidase-like, Early set domain 457 559 IPR015202 -
Tsu03g02328 563 PANTHER ALDEHYDE OXIDASE GLOX-LIKE 6 562 - -
Tsu03g02328 563 Gene3D - 35 454 IPR037293 -
Tsu03g02328 563 Gene3D Immunoglobulins 456 563 IPR013783 -
Tsu03g02328 563 SUPERFAMILY E set domains 453 559 IPR014756 -
Tsu03g02328 563 Pfam Glyoxal oxidase N-terminus 53 302 IPR009880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02328 Tsu-Chr3 26314364 26316264 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02328 - - mtr:MTR_3g075520 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02328 03 26314364 26316264 Tsu03g02328 03 26314364 26316264 ECH