Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02281 ATGAACTCCACGAACAGTCCAAGTTATGGAAACCCTCCACCACCATCAGAATGGTTAGAGGACACGCTTATTGATCTTTACTTATCTGGCTACAATAACGCAGCAGTTAGTGCGGCTGATACAGTGACAGTGCCCATGGAAACAGATGAATATAACTCCACATTGGAAGATAGTGCTTACAACAATGCTTATGAAGTGGAAAGTGAGTGGACCACAGGCCCAACGGATGAAAATGGCATGACtgagaataaaagaattgaaGATGAAGGCGTAGCTTGCAGCGATACTTATGAAGTTGAAGAAGATGAGTGGGTCCCAGATCTAGAAGACGAAAACCCCATAGCTGATGGGAGTGCTATAGATGAAGGTATCTTGTTGGATGAAGAAAAATGGAGAGCTCAGTATGGTCAAGTCATTGAATCgaggaaagatttgattttagaGTTTCCAGTTGTGGACTTGTGGGATTGGGAAATGGTTAGAGCATCCAAAAAGGATGGAAAGGATAAGGTGGCAAGGTTGGTTGGAAGACTGGTCAAACAATCTGCAAAGCGACATCCATCTATCTCAACGGGTGAAAAGAAATTTAGATCTGCTTCTATATGCGAAGTACATCTCGATCTGGTACGCGTCAAAACAGGACAGGTATATAGATTGCGAAATCCTAGTGCAAAATATGTGGCTTCGTTATCAAGTTATGATTCTGCCGATCCAACAAAAGATTGGGATTTTCCTCAGTTATCATCTAATACAAATAGTGTGCATGTCTCTAAGTCCGGTGAAAGTAATCCTTCCACTTCAAATGAATTTCGTACGGAGAAGGAATTGTCTATGTTGCCCAGTCAGCTTTCTGCATCCAAGcaaataaaatgtcaatacagAGATCGGGCGGCAGAAAGAAGAAACTTGCATGGAGGCTTTGGTGTAGGTCCAGGACAGAAGAACCTAGCTACTGGTGATGATACAGCATCATCACCTGATGCTTGTCCACAAGAAGCTGCAGAAGAGGCCTTGAAGAAGTCATTTGGAGCAGGCAGTTATGCCAGGAAACTTCTAGAAGGCATGGGCTGGAAGGAGGGAGAAGGGCTTGGCAGCTCCACAAAGGGCTTGGTGGAACCTATTCAACCAATTGGAAACATTGGCAGTGCAGGCTTGGGATGGCCTCGTCGAAATTGA 1176 0.426 MNSTNSPSYGNPPPPSEWLEDTLIDLYLSGYNNAAVSAADTVTVPMETDEYNSTLEDSAYNNAYEVESEWTTGPTDENGMTENKRIEDEGVACSDTYEVEEDEWVPDLEDENPIADGSAIDEGILLDEEKWRAQYGQVIESRKDLILEFPVVDLWDWEMVRASKKDGKDKVARLVGRLVKQSAKRHPSISTGEKKFRSASICEVHLDLVRVKTGQVYRLRNPSAKYVASLSSYDSADPTKDWDFPQLSSNTNSVHVSKSGESNPSTSNEFRTEKELSMLPSQLSASKQIKCQYRDRAAERRNLHGGFGVGPGQKNLATGDDTASSPDACPQEAAEEALKKSFGAGSYARKLLEGMGWKEGEGLGSSTKGLVEPIQPIGNIGSAGLGWPRRN 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02281 391 MobiDBLite consensus disorder prediction 241 283 - -
Tsu03g02281 391 PANTHER RNA-BINDING PROTEIN 4 389 - -
Tsu03g02281 391 SMART G-patch_5 342 388 IPR000467 GO:0003676
Tsu03g02281 391 Pfam G-patch domain 346 386 IPR000467 GO:0003676
Tsu03g02281 391 MobiDBLite consensus disorder prediction 304 328 - -
Tsu03g02281 391 ProSiteProfiles G-patch domain profile. 344 390 IPR000467 GO:0003676
Tsu03g02281 391 PANTHER D111/G-PATCH DOMAIN-CONTAINING PROTEIN 4 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02281 Tsu-Chr3 25613242 25617541 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02281 - - mtr:MTR_3g077300 639.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02281 03 25613242 25617541 Tsu03g02281 03 25613242 25617541 ECH