Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02280 ATGGCTTCCCCTGATGATGATTTCGATTTCGGTGGTGATATTGGTGGAAGGCATTcagGTATCAAGAGACCATCTCCGgattatgatgatgaagatTATGAAAACGATCCTTTTGCACCGAAGAAGGCCAAATCTAAAGCTGAAGAAACTGCCTCTGGTGTAACAACAGGAATGATCTTGTCGCTTCGTGAGAGCCTCCAGAGCTGTAAGGATCAGCTTGCAACATGCCAAAATGAGCTTGAGGCTGCAAAGTCTGAGATTCAGAGTTGGCATTCTTCAATTCAAAATGAGCCTGTTGTAAATGCTGGGGCTACTCCAGAGCCAAAAATGTTGATTAATTACCTTCAGGCCCTCAAATCATCTGAAGAGTCATTGAGAGAGCAGCTTgaaaaagtgaagaaaaaagaatcagCATTCATTAAAACATTTGCAAAAAGGGAACAAGAGATAGCTGAGTTGAAATCTGCTGTACGGGATCTGAAAGTACAACTCAAGCCACCATCAATGCAGGCCAGGAGGTTGTTACTAGATCCGGCTGTTCATGAAGAGTTCACACGTTTGAAGAATTTGGTGGAGGAAAAggacaaaaaattaaaggagtTGCAAGATAACATTTCTGCTATAACTTTTACTCCCCAAAGCAAGATGGGGAAGATGCTGATGGGTAAGTGCAGAACCCTGCAAGAAGAAAATGAGGAGATTGGAAATCAAGCTTCTGAGGGAAAGATACATGAATTAACAATGAAACTTGCATTACAGAAGTCCCAGAATGCACAACTCAGAAGTCAATTCAAAGGGTTGCAGAAGCATATGGAAGGACTGACAAATGATGTGGAGAGATCAAATGAAACGGTTCTTATGTTGCAAGGAAAGCTAGACGAGAAAGATCAGGAGATCGAAAGACTGAAACATGAACTCCAAGAAAACAACTTAAAGGAGGATGGAGTGTCTGATGCAACATTTAATAGGAGTGACGGCGATAAGTTGACGACTGAGGAGGATAAGTTAACGACTGAGGATGCTGcaaattaa 1032 0.3953 MASPDDDFDFGGDIGGRHSGIKRPSPDYDDEDYENDPFAPKKAKSKAEETASGVTTGMILSLRESLQSCKDQLATCQNELEAAKSEIQSWHSSIQNEPVVNAGATPEPKMLINYLQALKSSEESLREQLEKVKKKESAFIKTFAKREQEIAELKSAVRDLKVQLKPPSMQARRLLLDPAVHEEFTRLKNLVEEKDKKLKELQDNISAITFTPQSKMGKMLMGKCRTLQEENEEIGNQASEGKIHELTMKLALQKSQNAQLRSQFKGLQKHMEGLTNDVERSNETVLMLQGKLDEKDQEIERLKHELQENNLKEDGVSDATFNRSDGDKLTTEEDKLTTEDAAN 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02280 343 MobiDBLite consensus disorder prediction 305 343 - -
Tsu03g02280 343 PANTHER PROTEIN OF 37 KDA-LIKE PROTEIN, PUTATIVE-RELATED 3 340 - -
Tsu03g02280 343 Coils Coil 184 204 - -
Tsu03g02280 343 MobiDBLite consensus disorder prediction 20 48 - -
Tsu03g02280 343 Coils Coil 115 138 - -
Tsu03g02280 343 Pfam WTAP/Mum2p family 132 285 IPR033757 GO:0000381|GO:0005634|GO:0080009
Tsu03g02280 343 MobiDBLite consensus disorder prediction 1 54 - -
Tsu03g02280 343 Coils Coil 285 312 - -
Tsu03g02280 343 Coils Coil 143 163 - -
Tsu03g02280 343 Coils Coil 59 86 - -
Tsu03g02280 343 Coils Coil 243 277 - -
Tsu03g02280 343 PANTHER WILMS' TUMOR 1-ASSOCIATING PROTEIN 3 340 IPR033757 GO:0000381|GO:0005634|GO:0080009
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02280 Tsu-Chr3 25603826 25611816 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02280 K22824 - gmx:100805415 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02280 03 25603826 25611816 Tsu03g02280 03 25603826 25611816 ECH