Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02262 ATGCTCATAATCTTGGAATCTTGTATTGATGCAAGACCTTCTTGTATCTGTACAGGAATCCCTCATGTCCTCAAATTTGTCTCATGCACCGGTGCATCTCGATTATGCACCGGCTCAACTTTTTCAGATTGTCTAGATGAGCTGGAGTCGTCGGTGAGGCTTCTCCCTgtgaaagaaaaagttaaaactTACAAGTTCAGAGCGTCTCTTTCTGTCTGCATCATCACTTTTACATCCGCGAACAcactctctccctctctctccaTCAACACCAAGGCACCAACTACCTTTCTATTTCTTCTTCCCCGTAAATCCCCTTTTCCCTCTTCGTTTTATGGGATAGTTATGGGCAGTGTGGaaattattgatttattatcTAGTGATGATGAAAGTGAAAAGGTTGCTCCTTTAGCAGCTGTTAAATTGGAGCCAGAATATGTTAAAGGTGCCGAGAAACGGTGTTTGACTGGTGATCGGCGACTAGCCAAGCATAAGAAATCTCGAAGTCGCGCGACTAGACACGAAGCGGACGAAAATGTTAGTAATAGTAACTCCAGTGTATTGGAGCAGGGACCGTCGCCGGTTGATGACACTGGTATATCTTATGCATCGTCCATTTGTGCAGCACCGCTTTCCAGACAGTTTTGGAAAGCTGGAAACTATGATGATGGGGTTGGTTCTCAAATTACTGTCCAAGGTGGCAAAAACTATCTACATGTACACCCCATGTTTCTTCACTCAAATGCAACCTCACACAAGTGGGCGTTTGGCGCCGTAGCAGAGCTTCTTGATAATGCTGTCGATGAGATCCAAAATGGAGCTACCTTTGTCAGTGTAGATAAAACAACAAATCCAAGAGATGGAAGTCCAGCATTGCTGATTCATGATGATGGTGGTGGCATGGATCCAGAAGCAATGCGTCGCTGCATGAGTTTTGGATTTTCAGATAAAAATTCAAAGCTTTCTATTGGACAGTatGGCAATGGCTTCAAGACCAGTAGTATGAGGCTTGGTGCAGATGCTATAGTCTTCAGTCGTCATCTGAATAACGGGATTTTGACTCAAAGCATTGGACTTCTGTCATATACATTTTTGATGCAAACACGTCTTGACAGGATAGTAGTACCGATGGTGAATTATGAGTTTAATACCTCAACTGGATCATTGGACATGTTAAATGGCAAAGAACATTTTATGGAGAATTTATCATTGCTGTTACGTTGGTCACCATATTCATCAGAAACAGATCTTCTAAAACAATTTGATAACATGGGATCTCACGGCACTAAAGTTATCGTCTACAATTTGTGGTTTAATGATGAGGGGATTACAGAGTTAGATTTTGATACAGATCCCAAgGATATTCGTATTGCTTGGGATATCAAGAAGGTCGGCACTAAACCTGCATGGAAGAGAATCCAGGAGGAACATATTGCTAAACGATTTCGTTACTCTTTACGTGTGTACTTGTCCATATTGTACTTGCGGTTACCAACAACTTTCCAAATTATATTGAGAGGGGAAGCTGTGAAGCCACATAGCATTGCCGATGATCTTAAATTTGTCGAATTTGTCAAATACTCACCACAATGTAGTGGACATGTAGAGGAACTTTATTTAACAATTGGATTTCTTAAGGAAGCCCCTCATGTCAATATCCATGATTTCAATGTATATCACAAACATTGGCTGATACTGATAACATGCAAGCAGATTTTGTTGAGCCAACTCATGATAAACAAGATTTTGAGAAAACTTCCATGA 1764 0.3985 MLIILESCIDARPSCICTGIPHVLKFVSCTGASRLCTGSTFSDCLDELESSVRLLPVKEKVKTYKFRASLSVCIITFTSANTLSPSLSINTKAPTTFLFLLPRKSPFPSSFYGIVMGSVEIIDLLSSDDESEKVAPLAAVKLEPEYVKGAEKRCLTGDRRLAKHKKSRSRATRHEADENVSNSNSSVLEQGPSPVDDTGISYASSICAAPLSRQFWKAGNYDDGVGSQITVQGGKNYLHVHPMFLHSNATSHKWAFGAVAELLDNAVDEIQNGATFVSVDKTTNPRDGSPALLIHDDGGGMDPEAMRRCMSFGFSDKNSKLSIGQYGNGFKTSSMRLGADAIVFSRHLNNGILTQSIGLLSYTFLMQTRLDRIVVPMVNYEFNTSTGSLDMLNGKEHFMENLSLLLRWSPYSSETDLLKQFDNMGSHGTKVIVYNLWFNDEGITELDFDTDPKDIRIAWDIKKVGTKPAWKRIQEEHIAKRFRYSLRVYLSILYLRLPTTFQIILRGEAVKPHSIADDLKFVEFVKYSPQCSGHVEELYLTIGFLKEAPHVNIHDFNVYHKHWLILITCKQILLSQLMINKILRKLP 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02262 587 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 255 460 IPR036890 -
Tsu03g02262 587 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 257 349 - -
Tsu03g02262 587 MobiDBLite consensus disorder prediction 178 194 - -
Tsu03g02262 587 Gene3D - 243 435 IPR036890 -
Tsu03g02262 587 PANTHER HISTIDINE KINASE-, DNA GYRASE B-, AND HSP90-LIKE ATPASE FAMILY PROTEIN 116 566 - -
Tsu03g02262 587 MobiDBLite consensus disorder prediction 158 194 - -
Tsu03g02262 587 Pfam Morc6 ribosomal protein S5 domain 2-like 484 566 IPR041006 -
Tsu03g02262 587 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 116 566 IPR045261 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02262 Tsu-Chr3 25121489 25178905 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02262 - - gmx:100795667 667.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02262 03 25121489 25178905 Tsu03g02262 03 25121489 25178905 ECH