Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02260 ATGGGTTCTATTCTGAGTTCACAGAATACTCCTAAGACCAAAGAAGAAATGGAAACTGCTTTGAATAAAGCTAAGGAGATCGTTGCCGCTTCCCCTGTCGTTGTTTTCAGTAAGACTTACTGTGGTTACTGCAACCGGGTCAAGGCTCTACTCAAACAGCTAGGAGCAACCTACAAGGTCCTTGAATTGGATACAGAAAGTGATGGGGGTGATATTCAAGCAGCTTTAGCTGAGTGGACAGGGCAAAGGACAGTACCTAATGTGTTTATTGGAGGCAAACACATTGGTGGTTGTGACTCTGTTTTGGAGAAACATCGTGCAGGTCAATTGGTTCCCCTTCTCAATGATGCTGGAGCTATTGCCAATAACTCTGCTCAGCTCTGA 384 0.4479 MGSILSSQNTPKTKEEMETALNKAKEIVAASPVVVFSKTYCGYCNRVKALLKQLGATYKVLELDTESDGGDIQAALAEWTGQRTVPNVFIGGKHIGGCDSVLEKHRAGQLVPLLNDAGAIANNSAQL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02260 127 PANTHER GLUTAREDOXIN 2 12 127 - -
Tsu03g02260 127 Gene3D Glutaredoxin 12 127 - -
Tsu03g02260 127 SUPERFAMILY Thioredoxin-like 22 120 IPR036249 -
Tsu03g02260 127 PRINTS Glutaredoxin signature 78 91 IPR014025 -
Tsu03g02260 127 PRINTS Glutaredoxin signature 92 105 IPR014025 -
Tsu03g02260 127 PRINTS Glutaredoxin signature 33 51 IPR014025 -
Tsu03g02260 127 ProSiteProfiles Glutaredoxin domain profile. 21 121 - -
Tsu03g02260 127 TIGRFAM GRX_euk: glutaredoxin 33 113 IPR011899 -
Tsu03g02260 127 Pfam Glutaredoxin 33 95 IPR002109 -
Tsu03g02260 127 CDD GRX_GRXh_1_2_like 32 113 - -
Tsu03g02260 127 PANTHER GLUTAREDOXIN-C1 12 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02260 Tsu-Chr3 25103788 25107019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02260 18 120 Miscellaneous Gene Families AT3G02000 41.284 1.08e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02260 K03676 - qsu:111991481 198.364