Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02255 ATGGCTCAAACTATCTTCTCCTTCTCTACactctcttcctcttctttccTTCATCGCTCTCACACTCCGAACCTCTCTCTCCGAACCTCTTCCATCCGAACCTCTTCCCTAACCTATCCATTCTCTTTTCCAATTCACCGAACCACCACTTCCATTGCTGCTGCTGCTAACATCGCCGTTCGTCCCAATGTTGTTCCTCCCATTGAATCTGTTACTCAGCTAATTGAATCGTTGATTAATGGTGTTGATTTATCCGAAGCTGAAGCTGAATCGTGTCTTCACTTATTGTTGAATGAAGCTAATGAATCTTTGATTAGcgcttttcttgtgcttttgAGAGCTAAAGGAGAAACTGTTGAAGAAGTTGCGGGATTGGCGAAGGCTATGATGAAACATGCTACGAAGGTCGAAGGTTTGGTTGATGTGGTTGACATTGTCGGTACAGGAGGAGATGGTGCAAACACGGTTAACATTTCGACTGGAGCATCCATTTTAGCTGCTGCTTGTGGAGTAAAAGTTGCAAAGCAAGGAAATCGTTCGAGTTCTTCCGCATGTGGAAGTGCTGATGTGTTAGAAGCACTCGGAGTCGTTATTGACTTGGGTCCTGAGGGGATTAAAAAGTGTGTGAATGAAGTGGGAATTGGATTTATGATGTCTCCAAGGTATCATCCTGCAATGAAGATTGTCAGGCCTGTAAGAAAGCAGCTCAAAGTAAGAACTGTATTCAATATATTGGGTCCAATGTTAAACCCAGCACAGGCCTCTTTTGCAGTTGTTGGTGTATACACAGAAGACTTGGTTTACAAAATGGCCAAAGCACTTGATAGATTTGGCATGAAAAGAGCTTTAGTTGTCCACTCTGAAGGTTTGGATGAAATTAGTCCTCTTGGACCTGGTCTGCTGCTTGATGTTACTCCAGACAGGATTGATAAATTCTCATTTGATCCCTTGGAGTTTGGCATTCCTCGGTGCACTCTTGAAGACTTAAAAGGCGGTGACCCAAAATACAATGCAGAGGTTCTCAGACGTGTTTTGGGTGGAGAGAGAGGACCTATTGCAGATGCTTTTGTTCTCAATGCTGCAGCAGCTCTCTTGGTCAGTGGCTTTGTGAGGAACCTAGCTGAAGGGGTGTCTTTGGCACGTGAAACACAACAATCGGGAAAAGCTCTCAAGACTCTCAACTTGTGGAGGGATATCTCAAAGAAAATAAAAGATGCCGGGGACATATAA 1230 0.426 MAQTIFSFSTLSSSSFLHRSHTPNLSLRTSSIRTSSLTYPFSFPIHRTTTSIAAAANIAVRPNVVPPIESVTQLIESLINGVDLSEAEAESCLHLLLNEANESLISAFLVLLRAKGETVEEVAGLAKAMMKHATKVEGLVDVVDIVGTGGDGANTVNISTGASILAAACGVKVAKQGNRSSSSACGSADVLEALGVVIDLGPEGIKKCVNEVGIGFMMSPRYHPAMKIVRPVRKQLKVRTVFNILGPMLNPAQASFAVVGVYTEDLVYKMAKALDRFGMKRALVVHSEGLDEISPLGPGLLLDVTPDRIDKFSFDPLEFGIPRCTLEDLKGGDPKYNAEVLRRVLGGERGPIADAFVLNAAAALLVSGFVRNLAEGVSLARETQQSGKALKTLNLWRDISKKIKDAGDI 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02255 409 Hamap Anthranilate phosphoribosyltransferase [trpD]. 73 399 IPR005940 GO:0000162|GO:0004048
Tsu03g02255 409 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE, CHLOROPLASTIC-LIKE ISOFORM X1 38 405 - -
Tsu03g02255 409 Pfam Glycosyl transferase family, a/b domain 141 390 IPR000312 GO:0016757
Tsu03g02255 409 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 141 397 IPR035902 -
Tsu03g02255 409 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE 38 405 IPR005940 GO:0000162|GO:0004048
Tsu03g02255 409 Gene3D Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 139 408 IPR035902 -
Tsu03g02255 409 Pfam Glycosyl transferase family, helical bundle domain 73 133 IPR017459 -
Tsu03g02255 409 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 71 136 IPR036320 -
Tsu03g02255 409 TIGRFAM trpD: anthranilate phosphoribosyltransferase 75 396 IPR005940 GO:0000162|GO:0004048
Tsu03g02255 409 Gene3D Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 67 137 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02255 K00766 - gmx:100794615 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02255 03 25078749 25082215 Tsu03g02255 03 25078749 25082215 ECH