Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02254 ATGAGCGGCTCACCTGATCCGTTGGATTCATTTCCTCCGTTACGTCTTCGCCAATCGGACGCCGCCACCTCTCGCCGTTCTTCCTTCGGCGCCGACTCCGAATTAGAACGTTACTGCAGCGCTAATTCAATCATGGGAACACCGAGCACAAGCATGAGCCTTCACAGTGCCATCACCGTTTTTCACGATTTCTCCGATGTTGATTTCGGTTCTTCTAGACGCTTCGATGATGGAATAGCGACGGAGACAAATCGGAAGAATTTTAGGTATGGTTCGAGTGGATTGGAATTGTACGGTGATGATTGTGATGAGCTTGATATCACCGGTTTTGATTCGTCGGAGTTAATCGGAAATAACCGaactgaagaaaaagaaaaatttgatgcCAATGAAAATGAAGGTGAAGTTGGGGAAAGAGTGATTGAgaaggaagaggaagaggaattTTCGGAAGGTGAGGAATCTATGTTCAATTATGGGAGTGGTTGTGATGGTGATAATGAGAATGAGTTTGATTCGTCCAAAGGTCAAAATGAGAagaatgagttttatttttcgAAGAATTTGCATTTATACGAGGGAACAAAAATTGCAAATGAGAATCCATTGTTTATGAATTCTTCAGTGGCTTTTGGTTCACATGATTTGGAAGATTTTTTACTGCAAAATGGACCCGTTTCTATTGATTCTGATCTATTTCACAATCCGCGAGAAAATAATACTCGAATTGAAGATGAGGGAGTAAGTTCCGGTCAAAAGAATGAGAAGAATGCAGTCATTGTCAACGATGAAGTTGAAGAAACAAAGGATATTGGTAATCCAGAAGCTATAGAAGAGGTGAGGGATAGCGATGCAGATAGGGACATTGGCACCCCTGTTGCTTGTTGTGAAGTTCAAGGTGCTGACAAATTGGAAATAACCGGTCTGTTGTCAGAAGAAAATCCTCAGAAGAGTTTGAATGTTACTCATGGTGGAAGTGAGGGAAAGGGGAATGGGTATATGAATAGTGATGAAGTTGGTGCCTCTGGTGATGTTAAATTGGAAAATCCGGAGTTGGGTGATTCTAAATTGAAGTTTGACGACTTTCCTGATAGTAGAGTTGATGTAAGTTCTTCAGATGCATCTGTTTATGTAGGGAATGTGAATGCAAAATCATATGAGAACCTTAAACCAATTGTGCTGCCATCGAATGGTGGAATGAGGAAAACATTAGAGAGGTCGTCCACTTCGACAAATGTATTAGAAGAAAGTCATGTAATATCTAAGATAGAGGACCATGATCTAAATGAATTCTACGATGAGGTTGTTCAGGACATGGAAGAAATTTTACTGGAGTGTATGGATTCTCCTGCAGCTAGGTTTTCTGTTGGTAACAGAATACTTGATCCACAACTGTCTATGCCTTCAAGAGATGGTGGGTTGACTGCTTCTACTTCTAGGAAAGATGATGCTTACCTGCTAGTTCAGCGCCCGAGAAGAATAGATAGGATAGAAGTTGTAGGTGCAAGGCAGAAAAGAGGGGATGTTTCTTTCAGTGAAAGATTGGTAGGGGTGAAGGAATACactgtttataaaataaaagtgtgGAGTGGCAAAGATCATTGGGAGGTTGAAAAGCGATATCGTGATTTCTTAACTCTTCATCGTTGCATGAAAACCTTATTCAACGAGCAAGGCTGGACTTTACCTTTGCCTTGGTCTTCCGTTGAAAAGGAATCGAAGATATTTAGAAGTGCATCTCTTGATATTATTGCAAAGAGAAGTGTTCTTATTCAAGAGTGTTTACAGTCTATTCTCTCTTCCAGGTTCTTTTCAAGTCCTCCAAGAGCACTTGTTTGGTTTTTGTCCCCTGAAGATTCACATCCCAGTTCACCTGTGACAAATTCGCCAGTGTCTCTGTCTTCTTTTACAAGAGGGGAAAACATTCGAAACTCTTCCACTTGGGGGAAGACCATATCCCTTATTGTTGAACTTCCATCAAATAAATCAACGAGGCAGTTATTAGAAGCACAACATCATACATGTGCTGGATGCCATAGGCATTTTGATGATGGAAATACTTCAATTTGGGATTTTGTACAGACATTTGGATGGGGGAAGCCTCGACTCTGTGAATATACTGGTCAAATGTTCTGTTCTTCTTGCCATACAAATGATACTGCGGTCTTGCCAGCAAGGGTTTTACATCATTGGGATTTCACTCATTATCCTGTTTCTCAGCTGGCAAAGTCATATCTGGATTCTATACATGAACAGCCCATGCTTTGTGTCACTGCTGTTAATCCCTTCCTTTTGTCAAAGGTCCCAGCCTTACTTCATGTTATGAGTGTCAGGAAAAAGATAGGAACAATGCTTCCATATGTTCGCTGCCCGTTCCGTAGGTCTATCAACAAAGGAGTTGGAAATCGGAGATATCTTCTTGAAAGCAATGACTTTTTTGCTCTTAGAGATTTGATTGATCTTTCCAAAGGAGTCTTTGCTGCACTCCCTGTAATGGTGGAAACTGTATCGAGGACAATCCTGGAACACATTACTGACCAATGTCTCGTATGCTGTGATGTGGGAATCCCGTGTAGTGCTCGACAAGATTGCAGTGACCCATCTTCTCTCATTTTCCCATTTCAGGAAGACGAAATAGAAAGGTGCAAATCTTGTCAGTCGGTTTTCCATAAGCGTTGCTTTAGAAAGGTTGCAAATTGTCCTTGTGGGGAACAACTCAAACTAAACAAGACGAGGAGTTTAACTAACAGAGTAGGCCAATGGGGAGGTGGTGGTGGAACGAGAGGAGCTTTGGACTTGTTAGGCAAGGGACTTAGTTCTGGGCTGTCACCTCGGTTTCTCTCTGGATTATTTACGAAAGAAAAGCATGACAAAACAAGGGAGCATCAAGGAGAAAATATCATCTTAATGGGTGCCTTACCAAGCAATTCTTTATGA 2937 0.4052 MSGSPDPLDSFPPLRLRQSDAATSRRSSFGADSELERYCSANSIMGTPSTSMSLHSAITVFHDFSDVDFGSSRRFDDGIATETNRKNFRYGSSGLELYGDDCDELDITGFDSSELIGNNRTEEKEKFDANENEGEVGERVIEKEEEEEFSEGEESMFNYGSGCDGDNENEFDSSKGQNEKNEFYFSKNLHLYEGTKIANENPLFMNSSVAFGSHDLEDFLLQNGPVSIDSDLFHNPRENNTRIEDEGVSSGQKNEKNAVIVNDEVEETKDIGNPEAIEEVRDSDADRDIGTPVACCEVQGADKLEITGLLSEENPQKSLNVTHGGSEGKGNGYMNSDEVGASGDVKLENPELGDSKLKFDDFPDSRVDVSSSDASVYVGNVNAKSYENLKPIVLPSNGGMRKTLERSSTSTNVLEESHVISKIEDHDLNEFYDEVVQDMEEILLECMDSPAARFSVGNRILDPQLSMPSRDGGLTASTSRKDDAYLLVQRPRRIDRIEVVGARQKRGDVSFSERLVGVKEYTVYKIKVWSGKDHWEVEKRYRDFLTLHRCMKTLFNEQGWTLPLPWSSVEKESKIFRSASLDIIAKRSVLIQECLQSILSSRFFSSPPRALVWFLSPEDSHPSSPVTNSPVSLSSFTRGENIRNSSTWGKTISLIVELPSNKSTRQLLEAQHHTCAGCHRHFDDGNTSIWDFVQTFGWGKPRLCEYTGQMFCSSCHTNDTAVLPARVLHHWDFTHYPVSQLAKSYLDSIHEQPMLCVTAVNPFLLSKVPALLHVMSVRKKIGTMLPYVRCPFRRSINKGVGNRRYLLESNDFFALRDLIDLSKGVFAALPVMVETVSRTILEHITDQCLVCCDVGIPCSARQDCSDPSSLIFPFQEDEIERCKSCQSVFHKRCFRKVANCPCGEQLKLNKTRSLTNRVGQWGGGGGTRGALDLLGKGLSSGLSPRFLSGLFTKEKHDKTREHQGENIILMGALPSNSL 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02254 978 PANTHER DIFFERENTIALLY EXPRESSED IN FDCP 8 HOMOLOG 45 978 - -
Tsu03g02254 978 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 45 978 - -
Tsu03g02254 978 MobiDBLite consensus disorder prediction 1 31 - -
Tsu03g02254 978 Gene3D - 505 624 IPR036871 GO:0035091
Tsu03g02254 978 MobiDBLite consensus disorder prediction 315 345 - -
Tsu03g02254 978 ProSiteProfiles PX domain profile. 502 621 IPR001683 GO:0035091
Tsu03g02254 978 SUPERFAMILY PX domain 514 620 IPR036871 GO:0035091
Tsu03g02254 978 Pfam PX domain 529 616 IPR001683 GO:0035091
Tsu03g02254 978 SMART DUF4206_2 702 907 IPR025258 -
Tsu03g02254 978 CDD PX_domain 509 608 - -
Tsu03g02254 978 Pfam Putative zinc-RING and/or ribbon 702 906 IPR025258 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02254 - - gmx:100800081 1244.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02254 03 25067403 25074096 Tsu03g02254 03 25067403 25074096 ECH