Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02253 atgaGTTTTCTAACAGGAACTCCTAAAGGTTCTTGGGAACCAATTATGACTGTTAAGACAAATACTCAAAGTTATTGGCTTAATTGGAGGGTTTTACTTTGTTCAATTTGGGTTCTACTTTCAATAATTTTCTCATCATTGCTTATATTGAAGTATGAAAAACTTTTAAGAAATGTTTCATCAAGAAATGGTAGTGAAAGTGAAACactagaagaagaaaattcagCAATTTTGTATGAAGATGAAACATGGAGGCCTTGTTTAAAAGGAATTCACCCTGCTTGGCTTTTGGCTTTTAGAGTTTTTGCATTTCTTGTGCTTTTGATTCTTCTCACTGTTAATGCTGTTGTTGATGGAGGAAGCATTTTCTATTATTACACTCAGTGGACATTTGCTTCAATCACATTTTACTTTGGGCTAGGATCAATACTTTCCATACATGGATGTTACAAACATCATAAGAAATCAAGTGGTGATAAGGTTGATCATGTCGATGGAGATGCGGAACAAGGAATGTATGATACTCATGCACTCCCACAAAGTTCTTATACATCGAACCAGGGCAAAAATTTCGGTGTTTCAGAAGTTGCTGTTCTTCGCCAACATGCCGGCACTTGGggttatatttttcaaatcatattTCAGATAAATGCAGGAGCTGCATTGCTCACTGATTGTGTATTTTGGTTTGTATTTGTTCCATTTCTAACCATCAAAGATTACAATCTAAATTTTTTAGTAATCATTATGCACTCAATCAATGCTATTTTCCTCATAGGTGATACAGCTTTAAATTCCTTGCCTTTTCCTTGGTTTCGAATGGGATACTTTTGCTTATGGACAGTCACATATGTGATCTTCCAATGGATTGTTCATGCTTGCATTAATCTCTGGTATAATAATAAGcctttgtttttagttttaactCAATTACTtagaaaaaatacattattGTCTGATACAAGTTTTCCTGTCTTGAAAAAAAGGTGGCCTTATCCATTTCTTGATTTATCATCCTCATATGCTCCACTATGGTACTTTGCTGTGGCATTACTGCATATTCCATGCTATGGTATTTTCAATTTGGGAATGAAGCTCAAACATTATGTCTTGGCAACGCGCTATCCCGACTCATATCAATGTGTTAGACTTAGATGA 1158 0.3325 MSFLTGTPKGSWEPIMTVKTNTQSYWLNWRVLLCSIWVLLSIIFSSLLILKYEKLLRNVSSRNGSESETLEEENSAILYEDETWRPCLKGIHPAWLLAFRVFAFLVLLILLTVNAVVDGGSIFYYYTQWTFASITFYFGLGSILSIHGCYKHHKKSSGDKVDHVDGDAEQGMYDTHALPQSSYTSNQGKNFGVSEVAVLRQHAGTWGYIFQIIFQINAGAALLTDCVFWFVFVPFLTIKDYNLNFLVIIMHSINAIFLIGDTALNSLPFPWFRMGYFCLWTVTYVIFQWIVHACINLWYNNKPLFLVLTQLLRKNTLLSDTSFPVLKKRWPYPFLDLSSSYAPLWYFAVALLHIPCYGIFNLGMKLKHYVLATRYPDSYQCVRLR 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02253 385 PANTHER UNCHARACTERIZED 10 301 - -
Tsu03g02253 385 PANTHER UNCHARACTERIZED 329 383 - -
Tsu03g02253 385 PANTHER PROTEIN, PUTATIVE-RELATED 10 301 - -
Tsu03g02253 385 PANTHER PROTEIN, PUTATIVE-RELATED 329 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02253 Tsu-Chr3 25064113 25066640 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02253 - - gmx:100799543 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g02625 04 29664972 29669118 Tsu03g02253 03 25064113 25066640 ECH
Tsu04g03151 04 39274170 39277659 Tsu03g02253 03 25064113 25066640 ECH
Tsu03g02253 03 25064113 25066640 Tsu03g02253 03 25064113 25066640 ECH
Tsu04g02625 04 29664972 29669118 Tsu03g02253 03 25064113 25066640 PCT