Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02239 atggcTGATTTGATTCAAGAGGAACAACAAGTTCTTGGTATTGACGACAAGCGTGTACATTTGgagggtggtggtggtggagaaaAAGATATGAGTCCTGCTACAGGCAGTTCCATTCATAGATCAAGTTCAAGGCCTCAACTTGATGTTAGTAAAGCTGAAATTCAATCTAATGTTGAGGATAAGTATCCCACTATTTTGTTGCCTAATCAATCTGATGATTTGTCTCATCTAGCTCTTGATATTGGAGGATCTCTGATAAAGTTGGTGTACTTTTCGAGACATGAAGGCCAATCGGATGATGATAAAAGGAAGAAAACATTGAAGGAGCGATTGGGGCTTTCTAATGGTAACAGAAGAAGCTTTCCTATTCTTGGTGGAAGGCTTCACTTTGTGAAGTTTGAAACAAGGAAGATCAATGAGTGCTTAgatttcattcattcaaagCAGCTTCACCGTGGTGGTGGGTTGGAGTCACGTTACTCCGATTCCGTGGCTGATCAAAATGCCATAATTAAGGCTACTGGTGGTGGAGCATACAAGTATGCTGATCTTTTCAAAGAAAGACTTGGGGTTAGTCTTgacaaagaagatgaaatggattGTCTTGTTGCGGGAGCAAATTTCTTGCTTAAGGCAATACGTCATGAAGCTTTCACACACATGGAAGGCCAGAAAGAGTTTGTTCAAATTGATCCTAATGATTTGTTCCCTTATCTTCTAGTTAATGTTGGTTCCGGTGTTAGCATGATCAAGGTTGATGGGGATGGAAAGTTTGAGAGGGTTAGTGGGACAAATGTTGGTGGTGGTACTTATTGGGGCCTAGGAAGACTGTTAACAAAGTGCAAGAGCTTTGATGAGTTGCTTGAGCTAAGCCAGAAAGGAGACAATAGTACTATTGACATGCTTGTTGGGGACATTTATGGTGGTTTGGATTATTCTAAGATTGGCCTATCGGCTTCAACTATTGCTTCTAGTTTTGGGAAAACTATATCAGAAAAAAAGGAACTTGAAAACTACAGACCTGAAGACATATCACTCTCTCTTCTACGGATGATTTCATACAATATTGGGCAGATAGCTTACTTAAATGCATTGCGGTTTAAGTTGAAGAGAATCTTTTTTGGAGGATTTTTTATCAGGGGTCATGCTTATACCATGGACACTATTTCTTTTGCTGTTCAATACTGgtcTAATGGGGGTGCCCAGGCAATGTTTTTGCGACATGAAGGATTTCTGGGAGCTTTAGGTGCATTTATGAGTTATGAAAAGCATGGTTTAGATGACCTCATGGTGCATCAGTTAGTTGAAAGGTTTCCGATGGGTGCACCATATACTGGAGGCAAGATACATGGCCCGCCACTTGGAGATTTGAATGAGAAGATTTCATGGATGGAGAAGTTTTTACAAAAGGGAACAGAAATTACTGCACCTGTGCCAATGACTCCTGTTGCTGGAACTACCGGACTTGGAGGTTTTGAAGTCCCTTTGTCAAAAGGAAGTGCTCTGCGATCTGATGCGAGTGCTCTAAATGTTGGTGTTCTCCATCTAGTACCAACTTTGGAAGTGTTTCCGTTGTTAGCAGACCCAAAATTGTATGAGCCCAATACAATTGATCTCGCAGATCCCAAGGAATTAGAATATTGGCTCACTATTTTGTCAGAGCACTTGCCAGATCTTGTGGACAAGGCTGTTGCTAGTGAGGGTGGAACTGATGATGCTAAAAGAAGGGGTGATGCTTTTGCTCGTGCGTTTTCTGCTCACTTGGCAAGGTTAATGGAGGAGCCTTCTGCATATGGGAAGTTAGGTCTGGCCAATCTATTGGAAATGAGGGAAGAGTGCTTGAGGGAATTTCAGTTTGTTGATGCCTACAGAAGTATAAAGCAGAGGGAAAATGAAGCATCACTTGCTGTTTTACCTGACTTGTTTGTAGAACTTGATAGCATGGATGAGGAAACCAGACTGCTTACTCTAATCGAAGGCGTTCTTGCTGCAAACATTTTTGACTGGGGATCTCGTGCATGTGTAGATCTCTATCATAAAGGAACAATTATTGAAATTTACAGAATGAGTCGCAATAAAATGCGCAGACCTTGGCGGgttgatgattttgatgtctTCAAAGAGAGAATGTTAGGGACCGGGGACAAGAAGTTGCCCCCTCATAGAAGAGCTTtactttttgttgataattcaGGTGCTGACATTGTTCTAGGGATGCTTCCACTGGCTAGGGAGCTCCTCCGCCGTGGAACTGAAGTAGTTCTTGTTGCAAACTCGCTTCCTGCTTTAAATGATGTGACTGCAATGGAGCTTCCTGATATTGTAGCTGAGGCTGCCAagcATTGCGACATTCTAAGGCGAGCTGCTGAAGCTGGGGGCTTGCTTGTTGATGCGATGATTAATACAGATACCTCTAAAGAAAATTCATCTTCGGTCCCCTTGATGGTTGTTGAGAATGGATGTGGTAGTCCATGTATTGACTTGAGACAGGTCAGCTCTGAGTTGGCTGCTGCAGCAAAAGATGCCGATTTGATAATTTTGGAAGGGATGGGTAGATCTCTGCATACTAATCTCTATGCTCAATTTAAGTGTGATGCTCTGAAGCTTGCAATGGTGAAAAATCAGAGGTTGGCTGAAAAGTTGATTAAAGGGAACATATATGACTGTATTTGCAAATACCAGCCTGCTAGTTGA 2697 0.4053 MADLIQEEQQVLGIDDKRVHLEGGGGGEKDMSPATGSSIHRSSSRPQLDVSKAEIQSNVEDKYPTILLPNQSDDLSHLALDIGGSLIKLVYFSRHEGQSDDDKRKKTLKERLGLSNGNRRSFPILGGRLHFVKFETRKINECLDFIHSKQLHRGGGLESRYSDSVADQNAIIKATGGGAYKYADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHMEGQKEFVQIDPNDLFPYLLVNVGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNSTIDMLVGDIYGGLDYSKIGLSASTIASSFGKTISEKKELENYRPEDISLSLLRMISYNIGQIAYLNALRFKLKRIFFGGFFIRGHAYTMDTISFAVQYWSNGGAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKISWMEKFLQKGTEITAPVPMTPVAGTTGLGGFEVPLSKGSALRSDASALNVGVLHLVPTLEVFPLLADPKLYEPNTIDLADPKELEYWLTILSEHLPDLVDKAVASEGGTDDAKRRGDAFARAFSAHLARLMEEPSAYGKLGLANLLEMREECLREFQFVDAYRSIKQRENEASLAVLPDLFVELDSMDEETRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMRRPWRVDDFDVFKERMLGTGDKKLPPHRRALLFVDNSGADIVLGMLPLARELLRRGTEVVLVANSLPALNDVTAMELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTDTSKENSSSVPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRSLHTNLYAQFKCDALKLAMVKNQRLAEKLIKGNIYDCICKYQPAS 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02239 898 PANTHER PANTOTHENATE KINASE 15 820 IPR004567 GO:0004594|GO:0005524|GO:0015937
Tsu03g02239 898 Gene3D - 69 230 - -
Tsu03g02239 898 Gene3D - 534 621 IPR035073 -
Tsu03g02239 898 PANTHER PANTOTHENATE KINASE 2 15 820 - -
Tsu03g02239 898 Gene3D - 302 411 - -
Tsu03g02239 898 SUPERFAMILY AF1104-like 515 896 IPR036075 -
Tsu03g02239 898 MobiDBLite consensus disorder prediction 13 50 - -
Tsu03g02239 898 TIGRFAM panK_eukar: pantothenate kinase 77 421 IPR004567 GO:0004594|GO:0005524|GO:0015937
Tsu03g02239 898 Pfam Fumble 77 420 IPR004567 GO:0004594|GO:0005524|GO:0015937
Tsu03g02239 898 MobiDBLite consensus disorder prediction 35 50 - -
Tsu03g02239 898 PIRSF PanK_long 31 898 IPR015844 GO:0004594|GO:0015937
Tsu03g02239 898 Pfam Damage-control phosphatase ARMT1-like domain 606 884 IPR002791 -
Tsu03g02239 898 SUPERFAMILY Actin-like ATPase domain 76 217 IPR043129 -
Tsu03g02239 898 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 700 896 - -
Tsu03g02239 898 SUPERFAMILY Actin-like ATPase domain 189 421 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02239 Tsu-Chr3 24783245 24800790 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02239 K24265 - gmx:100781580 1607.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02239 03 24783245 24800790 Tsu03g02239 03 24783245 24800790 ECH