Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02212 ATGAATTCATCACCTCTCTTCATTTctctcatcttcatcttctcacTCCTCATCTCTTCCTCCAAACCAACCCTATCTTCCACCCTCGGTGTTGACGCTATCTCTCGCACTCTTCAAATCCAACACCGAGAAAGATCACCGCCGTCTGTCCAGGAAGCTGCTGCTCGCTCCCTCCTACTCCGCTTACTCCCTTCCCATTCCTCTTCCTTCCATTTCCGGATCCTCTCTAAGAAGCAATGCGGAGGTGAATATTGTTTCACTATCAATAATCATCCTTCTTTCGCAACACAAGGGAGTCCTCAAATTCAAATTGAAGGGACAACAGGAGTGGACATTGTTGCTGGTTTGCACTGGTATTTGAAGCATTGGTGTGGTTCACATATATCTTGGGACAAAACTGGTGGCTCCCAACTATTTTCAGTACCCAATGTGGGGTTTCTTCCACGTGTTGACGATGCCGGAATTTCGGTTCAGAGGCCTGTTCCATGGAACTATTACCAGAATGCTGTTACTTCTAGCTATTCTTTTGCTTGGTGGGACTGGAAAAGATGGGAAAAGGAAATTGACTGGATGGCTTTGCAAGGTGTCAACTTGCCACTTGCATTTACGGGACAGGAGGCTATCTGGCAGAAAGTGTTCAAGGAGAAATTTAACATGAGCATTTCTAATTTGAATTATTTCTTTGGAGGCCCCGCATTTCTTGCATGGTCACGTATGGGAAATTTACATGGATGGGGTGGACCATTGCCACAGAGCTGGTTTGATCAACAATTAATCTTACAGAAGAAAATTCTTGCCAGAATGTATGAGCTTGGGATGACTCCTGTCCTGCCAGCTTTTTCTGGAAATGTCCCAGCTGCCCTGAAATCTATATTTCCATCAGCAAAAATAACACGCTTGGGGAATTGGTTTTCTGTTAAGAATGACCTCAAATGGTGCTGCACTTATCTTCTTGATGCAACTGATCCCTTGTTCGTTGAGATCGGGAGAGCATTTGTCGAACAACAATTGCAAGAGTATGGAAGAACCAGCCACATATACAACTGTGATACCTTTGATGAGAACACCCCACCCATCGATGATCCAGAGTACATTTCTTCATTAGGTGCAGCAATCTTTAAAGGAATGCAGAGTGGTGATAATGACGCTGTTTGGCTGATGCAGgGATGGCTATTTTCATATGATCCGTTTTGGAGACCTCCTCAAATGAagGCCCTTTTGCATTCTGTTCCTGTGGGAAAGCTGGTTGTTCTTGACTTGTTTGCCGAAGTAAAACCCATATGGGCTACCACAGAGCAATTTTATGGTGTTCCTTACATCTGGAAAGTTGGAGTTGGAATGTCAATGGAAGGTATCGAACAGAATCCCATTGTATATGATCTGATGTCTGAAATGGCATTTCAGCACAAGAAAATTAATGTTAAGACGTGGATTGATTTGTATTCAACTAGACGATATGGAAGACAAGTTCCTTTGATACAAGAGGGATGGAATGTCTTGTATCATACCATTTACAATTGCACTGATGGAGCCTATGACAAAAACAGAGATATCATTGTAGCATTCCCAGATGTAGACCCGTCCTTACTTTCAGTAGAGCAGGAACACCCTCACCCCTATGGCAAGCCATTCTCGAGAGCAATTATCAAGGAAATAACTGATTCATTTGATCGACCTCACTTATGGTATTCAACATCAGAAGTAATTTATGCATTGGAGCTATTTATATCTAGTGGAAGTGAACTTTCAAAGAGTAGTACTTATAGGTATGACCTTGTTGATCTCACCAGACAAGTCTTAGCAAAATATGCAAATCAGCTGTTCTATAACGTCATTGAGGCATACCAATCACATGATGTTCATGAAGTGACCGTACTCAGCCAAAGATTTCTGGACCTGGTGGAAGATTTGGACTTATTGTTAGCTTGCCATGATGGATTTCTTCTAGGCCCTTGGTTAGATAGTGCTATACAGCTAGCTCAAAATGAAGAACAGAAGAGACAGTTTGAGTGGAATGCTAGAACACAAATCACCATGTGGTTTGACAACACAGATGAAGAAGCCAGTCTGCTTCGTGACTATGGAAACAAGTACTGGAGTGGGCTATTGCATGATTATTATGGACCCAGAGctgcaatttattttaaatatttaaaagaaagcTTAGAAAAAGATGAGGATTTCAATCTAAAGGAATGGAGGAGGGAGTGGATAAAACTTACCAATGATTGGCAAAGCCGTAGAAATATATTTCCAGTTGTAAGCAGAGGAGATGCTTTAAACACTTCTCGGTGGCTCTTCAACAAATACCTCAACCTGAGCAATCCTGAGACACTGGAGAGCCGGAGCGGACGCTTATCCGTGAAATTTCAATGA 2376 0.4154 MNSSPLFISLIFIFSLLISSSKPTLSSTLGVDAISRTLQIQHRERSPPSVQEAAARSLLLRLLPSHSSSFHFRILSKKQCGGEYCFTINNHPSFATQGSPQIQIEGTTGVDIVAGLHWYLKHWCGSHISWDKTGGSQLFSVPNVGFLPRVDDAGISVQRPVPWNYYQNAVTSSYSFAWWDWKRWEKEIDWMALQGVNLPLAFTGQEAIWQKVFKEKFNMSISNLNYFFGGPAFLAWSRMGNLHGWGGPLPQSWFDQQLILQKKILARMYELGMTPVLPAFSGNVPAALKSIFPSAKITRLGNWFSVKNDLKWCCTYLLDATDPLFVEIGRAFVEQQLQEYGRTSHIYNCDTFDENTPPIDDPEYISSLGAAIFKGMQSGDNDAVWLMQGWLFSYDPFWRPPQMKALLHSVPVGKLVVLDLFAEVKPIWATTEQFYGVPYIWKVGVGMSMEGIEQNPIVYDLMSEMAFQHKKINVKTWIDLYSTRRYGRQVPLIQEGWNVLYHTIYNCTDGAYDKNRDIIVAFPDVDPSLLSVEQEHPHPYGKPFSRAIIKEITDSFDRPHLWYSTSEVIYALELFISSGSELSKSSTYRYDLVDLTRQVLAKYANQLFYNVIEAYQSHDVHEVTVLSQRFLDLVEDLDLLLACHDGFLLGPWLDSAIQLAQNEEQKRQFEWNARTQITMWFDNTDEEASLLRDYGNKYWSGLLHDYYGPRAAIYFKYLKESLEKDEDFNLKEWRREWIKLTNDWQSRRNIFPVVSRGDALNTSRWLFNKYLNLSNPETLESRSGRLSVKFQ 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02212 791 Gene3D - 26 153 IPR029018 -
Tsu03g02212 791 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 44 772 IPR007781 -
Tsu03g02212 791 Gene3D Glycosidases 160 442 - -
Tsu03g02212 791 Gene3D Glycosidases 443 469 - -
Tsu03g02212 791 Pfam Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain 53 148 IPR024240 -
Tsu03g02212 791 Gene3D - 471 783 - -
Tsu03g02212 791 Pfam Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 165 442 IPR024733 -
Tsu03g02212 791 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 44 772 - -
Tsu03g02212 791 Pfam Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain 477 769 IPR024732 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02212 Tsu-Chr3 24041905 24051883 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02212 K01205 - gmx:100791160 1359.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02212 03 24041905 24051883 Tsu03g02212 03 24041905 24051883 ECH