Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02202 atgGCTTCATCAAGAGGTGGAAGTGAATTCAGGGAGTTGAGTACAGACCAAATTGAGAAGTCACTTGCTGCATCCTTGAAGGTTCACAAGACACCAGAGAAGCCATACCTTCTTGAAAAGAACAGTAGAAGCAACCCAAAAGAAGTTATCATCAGTTTTCCAGCATCAGGTGCTTTCAAAGATTGGTTTTCCAAAACTACCTTTGGTGAAACTGAAATAGATCTTAAACTATTTCCTTCACTTAGAAGCATTGGTAACAATGAACCTGCTTTGGTTAATAAATTCTTTCTCCAAAGATTCCAAGAGCTTTTGGAATCACTTAAAAAAGAGGTGGAGGATGCAATGAATAAGAAAAAGCAAATAGTGTTTGCAGGACACTCATCTGGTGGACCAGTGGCAATTCTGGCAACCCTTTGGACCATGGAACACCACCTGACTCCAAAATCTGATGGTGGTTTCCATCCCCTATGTATTACTTTTGGTTCTCCTTTAGTTGGAAATCACATATTTTCCCATGCTACAAGGAGAGAAGATTGGTCTAAATacttcttcaattttgtgttGAGATATGACATAGTGCCAAGAATCCTCCTTGCCCCTCTATCTTCTTTAGACCAAAAGTTTGAGACAGTTTCACAGATCCTAGATCCCAAAAACAAATCATTCATGAGCGAATCGAGTCTCAAAAGAATCGCTTCGACTTCAGATTTCTACTTTGAAGTTATATCAAATGCTGCAACTGTCTCTACACATGCTGCTTGCAAGCTAATGGGAACAACAGAAGCAACACTTGAAACACTTGCAAATTTTGTTCCTTTGAGTCCTTACAGACCCTTCGGAACTTACATTTTCAGCACTACAAGTGGAAATGAAGGAAAGCAAATTGTCATGAAAAACCCTGATGCAATTCTCCAGGTCATGTTTTTCTCTGCTCAATTAAGCTCTGAAGAGGAAACTGCTCAAGTTTCCTTTGAAAGCCTGCGACAACATTTAACTTATGGTGTTGACCTGCAAAAGAACTTAGGATTACAGAATTTTGTGTTATTGGACCAACTAGAGAAGATCCCTTTGTCTGAGCCTACTACTACCGGCGGTGACATTGCAACCATTAACATAGCCTTAAATGATCTTGGACTGAGTACAAGAGCAAGACTATGCATTAAAGCAGCCGCAGCATTAGAGGAACGAAAAAGGACCAACGAGAAAACCATAGAAGGGAAGAAAGGGTTTATGGAAGAAAAGATGAATGTACTGGCGAGTTACAGAGAAACGAGGGGGCATCAGAAAAAGGGTTACTACGATGCATTCAAGGATCAACTAGAAGCCCAAGATTTCCATGCAAATGTGTGGAGGCTAGAACTTGCAGGAGTATGGGATGAGATAATCGAAAAGCTATTAAATGATGAACTACCAGCTGAATTTGAAGTGAATAAAGAATGGATTGATAtaggaaaaaaatttagaagacTAGTTGAGCCTTTAGACATTGCTAATTACTATCGACATTCAAGGAACCGCGATGGACGTGCTTACATGGATAAAGGAGGAAGACCAAAACGTTACAGGTATACTCAAAGATGGTTGGAACATGCTGAGAGGAGGGAAGATGAAGGTTACTCAGAATCTTGCTTTTGGGCTGAGGTGGAAGATCTTTGTAATAAGTCTTTTGAAAATGTTAAGGAAAAGGTTTTGAAGTTGGAGGAAAAGATAAAGAAGTGGCATGAGAAAGGTATTGTTGGTAAGGATGTGTTTTTGGAGGATTCTACTTTTGTTAAGTGGTGGAAAAAACTGCCAATACAGCATAGGCAACAATCATGCattgaagatcttgttgaagtgTGA 1842 0.3855 MASSRGGSEFRELSTDQIEKSLAASLKVHKTPEKPYLLEKNSRSNPKEVIISFPASGAFKDWFSKTTFGETEIDLKLFPSLRSIGNNEPALVNKFFLQRFQELLESLKKEVEDAMNKKKQIVFAGHSSGGPVAILATLWTMEHHLTPKSDGGFHPLCITFGSPLVGNHIFSHATRREDWSKYFFNFVLRYDIVPRILLAPLSSLDQKFETVSQILDPKNKSFMSESSLKRIASTSDFYFEVISNAATVSTHAACKLMGTTEATLETLANFVPLSPYRPFGTYIFSTTSGNEGKQIVMKNPDAILQVMFFSAQLSSEEETAQVSFESLRQHLTYGVDLQKNLGLQNFVLLDQLEKIPLSEPTTTGGDIATINIALNDLGLSTRARLCIKAAAALEERKRTNEKTIEGKKGFMEEKMNVLASYRETRGHQKKGYYDAFKDQLEAQDFHANVWRLELAGVWDEIIEKLLNDELPAEFEVNKEWIDIGKKFRRLVEPLDIANYYRHSRNRDGRAYMDKGGRPKRYRYTQRWLEHAERREDEGYSESCFWAEVEDLCNKSFENVKEKVLKLEEKIKKWHEKGIVGKDVFLEDSTFVKWWKKLPIQHRQQSCIEDLVEV 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02202 613 Gene3D alpha/beta hydrolase 22 244 IPR029058 -
Tsu03g02202 613 Coils Coil 556 576 - -
Tsu03g02202 613 Coils Coil 97 124 - -
Tsu03g02202 613 PANTHER PROTEIN EDS1-RELATED 11 612 - -
Tsu03g02202 613 Pfam Enhanced disease susceptibility 1 protein EP domain 418 609 IPR041266 -
Tsu03g02202 613 Pfam Lipase (class 3) 51 196 IPR002921 GO:0006629
Tsu03g02202 613 SUPERFAMILY alpha/beta-Hydrolases 44 200 IPR029058 -
Tsu03g02202 613 CDD Lipase_3 47 196 - -
Tsu03g02202 613 PANTHER PROTEIN EDS1-RELATED 11 612 IPR044214 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02202 Tsu-Chr3 23890487 23894143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02202 114 197 Acyl Lipid Metabolism Gene Families AT3G07400 39.535 4.73e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02202 K18875 - gmx:100819703 707.597