Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02167 ATGGCTCAGTTGAATGCAATTCTCACACACTCATTCCTACCTACTGCTCCTTCAAGACATGCAAGAAATCAGCTGGTGCATCAGAGGTTCTGCAAGGCAAAACCTTCATCATTCAAAGAGTTGATGTCACCAAGAACAAGTTTTGGTGCTGCAAGGAAACATCAAGCTATAAAAGCAGTGCTGTATCAAGATGTAGAAATTTCCGACACCAAGAAGGTTGATGGACTAAGGGGTAAATTGGATAAGGTTGTTCTGGCTTACAGTGGCGGCTTAGACACATCGGTTGTTGTCCCCTGGCTGAGGGATTATGTATTCCCTTGCCTGCGTGCTGGTGCAGTTTATGAGAGGAAGTATTTGCTTGGAACGGCAATAGCTCGCCCTGTTATTGCAAAGGCCATGGTGGATATCGCCAAAGAAGTTGGAGCTGACGCTGTCTCCCATGGTTGTACAGGGAAAGGAAATGATCAGGCATGTATAATCATAATTATAGTTCGGTTTGAGCTATCTTTTTTCGCTCTGAATCCCAAGTTAAATGTTGTGGCTCCATGGAGGGAGTGGGATATTACGGGGAGGGAAGATGCTATTGAGTATGCTAAGAAGCATAACGTACCTGTTCCTGTTACCAAAAAATCCATATATAGTAGGGACAGAAATCTTTGGCACATAACTCATGAGGGTGATGTTCTGGAAGATCCAGCAAATGCACCTAAAAAGGATATGTACATGTTGACTGCAGACCCTGAGGATGCTCCAAATCAACCAGAATATGTGGAGATCGGGTTTGAGTCAGGCATTCCGGTGTCGGTGAACGGGAAGAGACTTTCCCCAGGAAATTTGGTTGCTGAGCTGAATGAGATAGGTGGAAGGCATGGAATAGGCCGTGTCGACTTAGTTGAAGACCGCATTGTAGGCTTGAAGAGCCGAGGAGTTTATGAAACTCCAGGTGGCACCATTCTCTTCACTGCGGCAAGAGACTTAGAGACTTTAACACTTGATCGCGATACACTTCAGCTTAAAGACTCGTTAGCACTGAAATATGCAGAGTTAGTGTATGCTGGTAGGTGGTTTGATCCACTTCGCGAGTCGCTGGATGCATTCATGGAGAACATCTCAAAGACTACAACAGGTTCAGTGAGTTTGAAACTGTATAAAGGTAGTGCATCTGTGACGGGCCGAAAGAGTCCTTATAGTTTGTATAGGGAAGATATTTCTTCATTTGAGAGTGGTGAGATATATAATCATGCAGATGCTGTAGGGTTTATAAGGCTCTATGGTCTTCCATTAAGGATCAGAGCCATGATGGAGCAAGGCATTTAA 1317 0.4442 MAQLNAILTHSFLPTAPSRHARNQLVHQRFCKAKPSSFKELMSPRTSFGAARKHQAIKAVLYQDVEISDTKKVDGLRGKLDKVVLAYSGGLDTSVVVPWLRDYVFPCLRAGAVYERKYLLGTAIARPVIAKAMVDIAKEVGADAVSHGCTGKGNDQACIIIIIVRFELSFFALNPKLNVVAPWREWDITGREDAIEYAKKHNVPVPVTKKSIYSRDRNLWHITHEGDVLEDPANAPKKDMYMLTADPEDAPNQPEYVEIGFESGIPVSVNGKRLSPGNLVAELNEIGGRHGIGRVDLVEDRIVGLKSRGVYETPGGTILFTAARDLETLTLDRDTLQLKDSLALKYAELVYAGRWFDPLRESLDAFMENISKTTTGSVSLKLYKGSASVTGRKSPYSLYREDISSFESGEIYNHADAVGFIRLYGLPLRIRAMMEQGI 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02167 438 ProSitePatterns Argininosuccinate synthase signature 1. 86 94 IPR018223 GO:0004055|GO:0005524|GO:0006526
Tsu03g02167 438 Gene3D Argininosuccinate synthetase, chain A, domain 2 214 437 IPR024074 GO:0004055
Tsu03g02167 438 CDD Argininosuccinate_Synthase 83 427 IPR023434 GO:0004055
Tsu03g02167 438 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 81 204 - -
Tsu03g02167 438 Pfam Arginosuccinate synthase 101 430 IPR001518 GO:0004055|GO:0005524|GO:0006526
Tsu03g02167 438 Gene3D HUPs 105 213 IPR014729 -
Tsu03g02167 438 Gene3D HUPs 71 104 IPR014729 -
Tsu03g02167 438 PANTHER ARGININOSUCCINATE SYNTHASE 79 103 IPR001518 GO:0004055|GO:0005524|GO:0006526
Tsu03g02167 438 PANTHER ARGININOSUCCINATE SYNTHASE 101 436 IPR001518 GO:0004055|GO:0005524|GO:0006526
Tsu03g02167 438 TIGRFAM argG: argininosuccinate synthase 101 431 IPR001518 GO:0004055|GO:0005524|GO:0006526
Tsu03g02167 438 Hamap Argininosuccinate synthase [argG]. 80 436 IPR023434 GO:0004055
Tsu03g02167 438 SUPERFAMILY Argininosuccinate synthetase, C-terminal domain 210 436 IPR024074 GO:0004055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02167 Tsu-Chr3 23204643 23208037 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02167 K01940 - gmx:100816038 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02167 03 23204643 23208037 Tsu03g02167 03 23204643 23208037 ECH