Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02156 ATGGCGCCGCACGATCTCCGCCGTCCGTTCAAGCGACCCTTAATCTCCGATCAAGAGAGACGAAGACAACACTCCCTACTCCGTCAAGCACAGAATCGCCTCGACGCCCAACGCCACGCTCGCTTCTTAGCCTCCACCGCATTCTCTCTTTCATCCTCCCAAACCTTCGATACACCCGAACCTCAACCCGAACCTGAGCACGAACCGGAACCGGAACCGCACCAGAAGGAGGAGCTCGACGTCTTGGAAGCATCGAAGCTAAAAGGCGCTGAAGCTCGAAAATGGTTCGCGAAACAACTCATGCATCCTGAATGGATGATCGATATCCCCGAAAATCTCACCAATGATTGGTTTGTTTTTGCAAGGCCTTCTGGAAAACGGTGTTTTGTTGTTTCCAGTAACGGAACAACGATAAGCCGTTTGAGAAACGGTTCAATACTTCACCGTTTTCCTTCTAAATTGCCAAATGGTGCAAGGACAAAGGAAGTATCTTCTGGTTCTTCGAATTCTTACTCTATACTCGACTGCATTTTCCACGAGCAGGATCAAACTTACTATGTTATTGATATGGTTTGTTGGCGTGGCTACTCCCTCTATGATTGTACTTCGGAGTTTAGGTTCTTTTGGGTGAATTCTAAGCTTGCTGAGACTGGTGCTTTTGAGCCTCCTTCATATTATCATAAGTATAGGTTCAGTTTAGTTCCAGTGTACAGTTGTGACCAGAGTGGTTTGCGTTCAGCTTATTGCGCGCCTGTGTCTTATGTCAAAGACGGTCTTCTATTCTATAACAAGCATGCACATTATCAAGCTGGGATTACACCATTAGCATTAGTTTGGAAGGATGAGAACTGCAGCCAATATGTTATGGACACCGACAACAAAGGACAGGTTCCTAACCAACAACAGGTGGTTTTGGAGCttcaagaagatggaaaactgGCTACCTGCGATGATCCTCCTATGGCATTTGGCTGTTTGGACGGAAGCTTCATCCAGCAGTCAGATTTGCATTCAGGGTATCTTCTACGGTTTGCAATTGGAGAGGGAGGATTGGTTTTGGTGGATGGGAAACTTGAGAAAGCTGATCTAAAGTATCTTGGCAAAGCCAATCGAGCTCGTGCCTCTGCTGATAGTTTCTCTAAGGTTATGTTCCAATATAGTGTTCGGCACTCCCCCCTCAGAATTGATGATTTGTTGGGATCTGTCAGCTCCCCAGTAGATCAAGAAACTGAAACACGCGACGTTGAGATGGATGGTTGA 1260 0.4587 MAPHDLRRPFKRPLISDQERRRQHSLLRQAQNRLDAQRHARFLASTAFSLSSSQTFDTPEPQPEPEHEPEPEPHQKEELDVLEASKLKGAEARKWFAKQLMHPEWMIDIPENLTNDWFVFARPSGKRCFVVSSNGTTISRLRNGSILHRFPSKLPNGARTKEVSSGSSNSYSILDCIFHEQDQTYYVIDMVCWRGYSLYDCTSEFRFFWVNSKLAETGAFEPPSYYHKYRFSLVPVYSCDQSGLRSAYCAPVSYVKDGLLFYNKHAHYQAGITPLALVWKDENCSQYVMDTDNKGQVPNQQQVVLELQEDGKLATCDDPPMAFGCLDGSFIQQSDLHSGYLLRFAIGEGGLVLVDGKLEKADLKYLGKANRARASADSFSKVMFQYSVRHSPLRIDDLLGSVSSPVDQETETRDVEMDG 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02156 419 MobiDBLite consensus disorder prediction 47 76 - -
Tsu03g02156 419 Gene3D DNA ligase/mRNA capping enzyme 2 306 - -
Tsu03g02156 419 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 96 280 - -
Tsu03g02156 419 MobiDBLite consensus disorder prediction 61 76 - -
Tsu03g02156 419 MobiDBLite consensus disorder prediction 1 33 - -
Tsu03g02156 419 CDD Snurportin-1_C 95 282 - -
Tsu03g02156 419 MobiDBLite consensus disorder prediction 1 28 - -
Tsu03g02156 419 PANTHER SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 1 418 IPR017336 GO:0005634|GO:0005737|GO:0061015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02156 K13151 - gmx:100801927 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02156 03 23037052 23041181 Tsu03g02156 03 23037052 23041181 ECH