Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02139 ATGTCCAGGCCTTTGTACAGAGGTGTGTCTGGGGTGTCTGGGATTCGGATCCCTGATAACAGCATCGATTCGTGGGACTCTCAATCCAAAGATAAAACAGAAAAAGACAGTTCTGATAGAAAAGGTTCTTCTGATCAGAATCCCTTACAATTGAAGTCCCCCTTTAGGTTGCTTTTTGCAGATAATAATTCTCATCCTAAATATGGTGTCACTGAGAATGGTTTTTCGCCCGATCCGTTCATTCTTGGCACTCCTAGAAGTCGGCATAAGTTGATTCTTTTTTTCATGAAGTTTAGTATAGTATTTATAGTTATTCTTGCTCTTGCTGGATCTTTTTGGTGGACAATCTCAATTTCAACTACATCAAGAGGTCAAATTTACCATGGTTATAGAAGACTTCAAGAGAAACTTGTATCGGACCTTTTGGATATCGGCGAGATTTCTTATGCTCCCTCAAAACAGAAAGAATTGGATTTCTGTTCTCAGGAGTTTGAAAACTATGTTCCTTGTTTTAACGTTTCAGACAATCTAGCTCAGGGTTACTCTGATGGCAGTGAGTTGGATAGGCAATGTGGCCGTGAACTTAGGCAAGATTGTTTACTTCTCTCACCGATGACGTACAAAATTCCTCTTCGGTGGCCAACTGGAAGGGATGTTATCTGGGTTTCAAATGTTAAAATCACTGCACAGGAAGTTCTTTCTTCTGGAAGTTTGACCAAGAGGATGATGATGCTCGATGAAGAGCAAATTTCATTTCGTTCTGCCTCTCTTATGTTTGATGGTGTTGAAGACTACTCACACCAAATTGCAGAAATGATTGGACTTAGAAATGAATCTAACTTCATACAAACAGGGGTTAGAACCATTCTGGACATTGGTTGTGGCTATGGTAGCGTTGGTGCGCACCTCTTTCACAGTCAACTTTTAACTATGTGCATTGCAAACTATGAGTCTTCCGGGAGTCAAGTTCAACTTACACTTGAGAGAGGTCTCCCTGCTATGGTTGCGTCTTTCACCACAAAACAGTTGCCATATCCATCTCTCTCATATGATATGCTACATTGTGCTAGATGCGGCATAGATTGGGACCAGAAAGATGGAATTCTCTTAATTGAAGCTGATCGACTCTTAAAACCTGGGGGCTACTTTGTCTGGACTTCGCCACTTACAAATGCTCGTAACAAAGACAGTCAGAAAAGGTGGAAGGTCATACATGATTTTGCAGAAAACCTTTGCTGGGAGATGCTATCACAGCAAGATGAAACTGTTGTATGGAAGAAAACTAGTAAAAGAAAATGCTATAGTTTAAGAAAGAATGgttctcctcctcctcctttaTGTAGTAGAGGCTATGATGTGGAGTCTCCGTACTATCGAGAACTGCAAAATTGCATAGGAGGAACACATAGCAGCCGTTGGATTTCTATTGAAGAGAGGGCAACCTGGCCTTCAAGGGATCACCCGAAAAAGAACGAGCTTGCAATATATGGATTGCAACCTGATGAATTTGCTGAGGACGCCGACAGCTGGAGGACAGCAGTACGAAATTATTGGTCTCTTCTGTCACCTTTGATATTTTCTGATCATCCAAAGAGACCCGGTGATGAGGATCCTCCACCACCTTACAACATGCTAAGAAACGTGCTAGACATGAATGCTCATTTTGGTGGTTTTAATTCTGCATTGTTGCAATCTGGAAAGTCTGTGTGGGTCATGAATGTGGTGCCGACGAGTGGACTCAACTATCTTCCCTTGATCCAGGACCGCGGTTATGTTGGCGTTTTGCATGATTGGTGCGAGGCCTTCCCAACATACCCTCGAACCTATGATTTGGTACACGCCGCAGGGTTTTTATCCATTGAAGCTGCTCAGCAGCACAGATGTACCATGCTTGATATATTCATTGAAATTGACAGGTTACTTCGGCCAGAGGGTTGGATTATAATTCGCGATACAGCTCCTTTGATAGAGTCAGCTAGAGCTTTAACAACTCGGCTGAAGTGGGATGCAAGAGTTATAGAAATTGAAAGTGATAGCGATCAGAGACTACTGATCTGCCAGAAGCCTTTCTTCAAGAGACAAGCAAATTAA 2091 0.418 MSRPLYRGVSGVSGIRIPDNSIDSWDSQSKDKTEKDSSDRKGSSDQNPLQLKSPFRLLFADNNSHPKYGVTENGFSPDPFILGTPRSRHKLILFFMKFSIVFIVILALAGSFWWTISISTTSRGQIYHGYRRLQEKLVSDLLDIGEISYAPSKQKELDFCSQEFENYVPCFNVSDNLAQGYSDGSELDRQCGRELRQDCLLLSPMTYKIPLRWPTGRDVIWVSNVKITAQEVLSSGSLTKRMMMLDEEQISFRSASLMFDGVEDYSHQIAEMIGLRNESNFIQTGVRTILDIGCGYGSVGAHLFHSQLLTMCIANYESSGSQVQLTLERGLPAMVASFTTKQLPYPSLSYDMLHCARCGIDWDQKDGILLIEADRLLKPGGYFVWTSPLTNARNKDSQKRWKVIHDFAENLCWEMLSQQDETVVWKKTSKRKCYSLRKNGSPPPPLCSRGYDVESPYYRELQNCIGGTHSSRWISIEERATWPSRDHPKKNELAIYGLQPDEFAEDADSWRTAVRNYWSLLSPLIFSDHPKRPGDEDPPPPYNMLRNVLDMNAHFGGFNSALLQSGKSVWVMNVVPTSGLNYLPLIQDRGYVGVLHDWCEAFPTYPRTYDLVHAAGFLSIEAAQQHRCTMLDIFIEIDRLLRPEGWIIIRDTAPLIESARALTTRLKWDARVIEIESDSDQRLLICQKPFFKRQAN 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02139 696 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 202 398 IPR029063 -
Tsu03g02139 696 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 546 667 IPR029063 -
Tsu03g02139 696 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 166 688 IPR004159 GO:0008168
Tsu03g02139 696 MobiDBLite consensus disorder prediction 1 49 - -
Tsu03g02139 696 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 15 694 - -
Tsu03g02139 696 Gene3D Vaccinia Virus protein VP39 249 432 IPR029063 -
Tsu03g02139 696 MobiDBLite consensus disorder prediction 25 42 - -
Tsu03g02139 696 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 15 694 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02139 Tsu-Chr3 22774785 22781367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02139 K23870 - gmx:100812530 1207.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02139 03 22774785 22781367 Tsu03g02139 03 22774785 22781367 ECH