Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02133 ATGGCCTTTTGTTCATTCTTCAtttctaaaaccctaaaaaaccaTAACCATTACTTCACCGCTAAATTTTCTACCTCTTTTCTAGTAACCAAAACcccaaaaaaacacaagaaaaaacacaaacccAAATCAAGTCCCAGAACAAACCCAATCCAAACTCAACCAAACCGGGTAACCGAATTTGAACGCATCGTAGAACGCGAAACCCTAATGAAATTCGTCACAAGATCAAAAAACTATCTCTCTAACCAACCGGAACACGTTCTTCAACTCGACGACGCCGGTAAACTCCACCGTGAACTCGGTTTCCCACGTGGCCGGAAAATCGCTAAATCAATCCAACGTCATCCGTTACTTTTCGAAACTTACCGTCACTCCGACGGTAAAATGTGGCTTGGATTCACCGATCTAATGGAAGAATTAATTGCGGAAGAACAATCGATTATGGAATCAATGGAACTCGATCGTGTCGATAAGGTTCGTAAGCTTCTCATGATGTCGAGATTTCACCGTATTTCACTAGCTAAAATTCATCACTGTAGAAATTTATTTGGTATACCGGATGATTTTCGTGACCGGGTTGCGAAATACCCGAATTACTTTCGCGTAGTTGTTGATATCAACGACGGGAAGAGTGTTCGGGTTCTTGAGTTGGTTAAATGGGATCCACTTTTGGCTGTGAGTGCGATTGAGAAAGAGTTTATGGTGAATGAAGAAGCTGCTAAGAGGAAATTTAATTTTCCTGTTAAACATGGgaaggatttggatttggaatgTGATGATGAAAAGAAGCTGAATTTGTTAAATGCTCTTCCGTTGGTGTCGCCTTATTCGGATGGTTCGAAATTAGATGTGTGGACTTTGGAAGCTGAGAAATATAGGGTTGGATTGATTCATGAGTTTTTGAGTTTGACATTGGAGAAGAGAGCTTCAATTCATCACCTTGTTGAGTTTAAGGAGGAGTTTAGTTTGACTAAGCATACTTATCATATGTTAGTTAAGCAGCCGAGGGCGTTTTATTTGGCTGGAACTGAGATGAATTGGGTTGTGTTTTTGAAAGATGGTTATGATCGAAATGGTGTTTTGATTCAGAAGGATCCTCAGGTGTTGTTTAATGAAAAGCTTTATAAGTATGCTCAGATACAGGAAATGGAACCTGGTTCTGACGTTGGATTCGAAAATCAACTTATGGATTGA 1197 0.3768 MAFCSFFISKTLKNHNHYFTAKFSTSFLVTKTPKKHKKKHKPKSSPRTNPIQTQPNRVTEFERIVERETLMKFVTRSKNYLSNQPEHVLQLDDAGKLHRELGFPRGRKIAKSIQRHPLLFETYRHSDGKMWLGFTDLMEELIAEEQSIMESMELDRVDKVRKLLMMSRFHRISLAKIHHCRNLFGIPDDFRDRVAKYPNYFRVVVDINDGKSVRVLELVKWDPLLAVSAIEKEFMVNEEAAKRKFNFPVKHGKDLDLECDDEKKLNLLNALPLVSPYSDGSKLDVWTLEAEKYRVGLIHEFLSLTLEKRASIHHLVEFKEEFSLTKHTYHMLVKQPRAFYLAGTEMNWVVFLKDGYDRNGVLIQKDPQVLFNEKLYKYAQIQEMEPGSDVGFENQLMD 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02133 398 PANTHER OS09G0473400 PROTEIN 20 389 - -
Tsu03g02133 398 MobiDBLite consensus disorder prediction 31 45 - -
Tsu03g02133 398 MobiDBLite consensus disorder prediction 31 56 - -
Tsu03g02133 398 Pfam Plant organelle RNA recognition domain 57 381 IPR021099 GO:0003723
Tsu03g02133 398 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 20 389 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02133 Tsu-Chr3 22714510 22717050 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02133 - - gmx:100813429 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02133 03 22714510 22717050 Tsu03g02133 03 22714510 22717050 ECH