Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02130 ATGGCGGCCACTTCTGAATCTTCCACCGGCAACAACTCTTCTCTTCCGGTTATTGATCTCCGTCTTGTTTCTCAACCCGAACTATTCACTCTCTCTTTTTCGCACGATACCGGTCGTAACCGTCGCATCGACGACGATTCCGTTATCCCTAGAATTGACCGTTCAGTTTTCAACGAGTCCGCCGGTAGCCGTAAACAGACGTTTTCTCGTCTCAATTTTCGTAACAACAACAACCCGAACTCTTCCGTTCCCGTTCCTGTTCTCGTTGCTCCCGCTGTTCCCGCTCTTGAATCTTCGTCTTCGCACATTGCCGTTGACGAAGAGAATTCTCAAATAATCGATCTTCTTCAACGGCTTTTCGGTGTTGAAGCTCTTCGCGGCGCCAATGATGACCGTTTGGTTCCGTTTCAGGGTGAATTCAAACAACCTGCTATTGAATTTACGCCTCAAGGTACTCAGAGTGTTTCAATTGGCGGTGTGGATAGTAGTCAAAGGAAGCGGAAGCGCGGACGGCCACGCAGGGACGAGAGTCCGGTATCGGATATGCAGGTAAAGGAAAGGAGTTTAGTTGTTGTCGGCGAGGGTGATGTGGAGATGGTGGAAGCGGTTAATGAACAGAAGGTTGAAGCGGTTAACAGCAAGAAAGATTTTGTTCTGGAAGATGTTGGGGATCCGATTGTGGAGGAGTTGATAGTGAGGACACAAGGGATGAATACGGAGGCGCAATTGTCGGAGTTTTTGGAGGGTTTGAATGGTGTTTGGGGAAGTGATAGGAAGAAGAGAAGGATTATTGATGCTAATGTTCTCTGTGATTTGTTGCCAACTGGATGGAAGCTTATTCTTATTCTGCAGAGGAGAGGGGCTCGTGCTTCGGTGGTTTGTCGCCGTTACGTAAGCCCTGATGGACGCCAATTTGAGTCATACAAGGAGGTTTCTTCATACTTGGATGGTAGTCAGCAGTTCTCCAATAATATCAATATGGCATCTGAAAGTCAGAATGTTGGTCACGTTCCTACAGGTGGCATTAAAATTGATGACAACGCAAGTTCTCTTAATGAGAAGCATGCCACCATATCATCATCAATTGGAGCTGGAAAGCGAAATACTTCTGGTGGGTATTTAAATGGTGACCGGGCTATGGATTTTGAATTAGGTGATACTACTAGTGGAGCCTTTGGAGTCTCTGACCATCCAGCTGACGATAAGCTACCACTGAAGGCCGATAAGAATGATGCGAATTCAGATCAGGGATGTTCTCTTTCAGAGGACAGAGTTTATAATCAGAGTGCTGGTCACTTCCCTACAGGTGGCATGAAGATTGATGGCAATGCAAGTTCTCATAAGAAGAAGCAAGCCACCATGTCATCATCAATTGGAACTGAAAAGCTGAACAGTTCTTACCGGAAACCGGATCGGAAATTGGTTCTTGGTCTTAAAGCTATTGATGTTGCATGCAATCCATATCCTTTAGATTTCAAAGCTCCTATCTCCAATAGTAGCTGTAGTATTAATCGTTTTTCTGATGAAAGAAATGATGTGAGTTGCATAAAAGGTGGCATTAGTGTTTTTGATGGTCAGGATAAAAGTACTGGATGCTATGAAACTGTTCCCTATGGAAATGAGCAAGTACATGTTGGTGGTAATGGGCTTGGGTTTTCCACCACATTAGTCGAAAAGCACATTCAGACAATAGGTTCTGAAAATAGTATGCTGGTTCCAAATTCTGAAGGGAAAAATGATGGAAAGCTAGTTAAGGATGGCAGTCAACAAATTATTTCTAGTAGATATCTGTCAGAAATTGAAGATATTTCTACTAATAGTAAACTTCAGTATGGTTCTGAAGGCTCTCTTGTCCCATCCCAGAATGGACTTAATCACACATCTATGGACAATGTGAACATGGCACAAACTTCTGTGCTGAAGGACTCTGCTGAGGGAAATTTTTTCTATAATGATATACCTAGCTCCTCCATTGATGAGAGAACATGGGATCCCAATGGATACATTAATGATATTTCTTTTAGTGTTTGGCCACAAGATGCATCTGAGTCTGGTGGAGTTGATTTTACTCCCAATCTTTATGTAGGTGACAATGTTGGTCATAATCATGTTCCTCCAATGGATGAAGTTGTGACAAGCTGTTTACAGAAAAGTTCTATGAATGACCAAATTTTCACAATGGACAATCTGTTGCACAGCAGTTCTGAAAGTAACTTATTTACTGTAACCGAGAATCAGCACCCTTCTGCTTTTCATGATAATACGAATAACAACTCAGATGGAACCTTTGGTGCACTCAAACATATTGATGATGGTTGCATGAAGCCTCAGTCAGGAATTGTTTCTTGCAGCGATGTTGTTGCAATAGATGCATATGCATCTCCTAGAGGCATGCAGGGAAGACCACAATCCGTTTCTGATGGAAGTATGTTAAACCAATTTGACAAGCAAAATGATGATGGTGTTAATATAGGAAATAATTCCTGCTTATCAGAAATGCCTAAGAGTGAAGTTGAAATGTTGCATACCGACTCGATGGGCATGCCTAACTTTCGGTAG 2559 0.4279 MAATSESSTGNNSSLPVIDLRLVSQPELFTLSFSHDTGRNRRIDDDSVIPRIDRSVFNESAGSRKQTFSRLNFRNNNNPNSSVPVPVLVAPAVPALESSSSHIAVDEENSQIIDLLQRLFGVEALRGANDDRLVPFQGEFKQPAIEFTPQGTQSVSIGGVDSSQRKRKRGRPRRDESPVSDMQVKERSLVVVGEGDVEMVEAVNEQKVEAVNSKKDFVLEDVGDPIVEELIVRTQGMNTEAQLSEFLEGLNGVWGSDRKKRRIIDANVLCDLLPTGWKLILILQRRGARASVVCRRYVSPDGRQFESYKEVSSYLDGSQQFSNNINMASESQNVGHVPTGGIKIDDNASSLNEKHATISSSIGAGKRNTSGGYLNGDRAMDFELGDTTSGAFGVSDHPADDKLPLKADKNDANSDQGCSLSEDRVYNQSAGHFPTGGMKIDGNASSHKKKQATMSSSIGTEKLNSSYRKPDRKLVLGLKAIDVACNPYPLDFKAPISNSSCSINRFSDERNDVSCIKGGISVFDGQDKSTGCYETVPYGNEQVHVGGNGLGFSTTLVEKHIQTIGSENSMLVPNSEGKNDGKLVKDGSQQIISSRYLSEIEDISTNSKLQYGSEGSLVPSQNGLNHTSMDNVNMAQTSVLKDSAEGNFFYNDIPSSSIDERTWDPNGYINDISFSVWPQDASESGGVDFTPNLYVGDNVGHNHVPPMDEVVTSCLQKSSMNDQIFTMDNLLHSSSESNLFTVTENQHPSAFHDNTNNNSDGTFGALKHIDDGCMKPQSGIVSCSDVVAIDAYASPRGMQGRPQSVSDGSMLNQFDKQNDDGVNIGNNSCLSEMPKSEVEMLHTDSMGMPNFR 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02130 852 MobiDBLite consensus disorder prediction 147 183 - -
Tsu03g02130 852 MobiDBLite consensus disorder prediction 147 161 - -
Tsu03g02130 852 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 5 359 IPR037472 -
Tsu03g02130 852 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 446 835 IPR037472 -
Tsu03g02130 852 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 263 332 IPR001739 GO:0003677
Tsu03g02130 852 Pfam Methyl-CpG binding domain 267 320 IPR001739 GO:0003677
Tsu03g02130 852 Gene3D - 265 332 - -
Tsu03g02130 852 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 5 359 - -
Tsu03g02130 852 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 446 835 - -
Tsu03g02130 852 SUPERFAMILY DNA-binding domain 265 318 IPR016177 GO:0003677
Tsu03g02130 852 MobiDBLite consensus disorder prediction 433 464 - -
Tsu03g02130 852 MobiDBLite consensus disorder prediction 447 464 - -
Tsu03g02130 852 MobiDBLite consensus disorder prediction 391 419 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02130 - - mtr:MTR_3g074640 978.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02130 03 22676119 22682778 Tsu03g02130 03 22676119 22682778 ECH