Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02124 ATGACAATGCTAGAACCCAACAACAATTCTCTTCCCATTTTCTTTAACCCCAGCTTTGATTTTGGAACTGGGGGATTATTTCTCGAAACCACAATTCCCGATTCCTTTGTTCGTTTCATTTCTTTGAGAATTCCGTTAACTGCTTCTTCTGAATCCAATCTTCACCGCCGCCAACGGCGAAGTGTTAAGGCGGTTGGGTGTTTTTTGTCAGTTAGCTTACCGAGTAGTACTAATCTTCCTGCAAATTCCAAACCATATGTACTGCAAGATGGTGAGCACGTTTCTGATAAGGATACGGCACTGGATGGTGTCGTTTCGCATAAGAAGATTAGGGCAAGAGAACGCGGTGCTGTTAATACCACCAAGCATCTATGGGCTGGTGCTATATCTGCAATGGTTTCTAGAACTTGTGTTGCTCCACTTGAAAGACTTAAGCTGGAATATATAGTTCGTGGCGAGAAGAGGAATATCTTTGAGCTTATTAAATCAATTGCTACGTCTCAAGGGTTGAGAGGTTTTTGGAAGGGGAACCTTCTTAATATTCTGCGAACAGCTCCGTTCAAAGCTGTTAATTTTAGTGCTTACGATACCTATAGAAAGCAACTACTTAGATTCTCCGGGAATGAGGAAACTACCAATTTTGAGAGGTTTATTGCTGGTGCTGCTGCTGGGGTTACTGCCACTACTATTTGCCTGCCACTCGACACTATTAGGACCACGATAGTGGCACATGGCGGAGAAGCTTTTGGGGGTGTAATTGGTGCTTTTCAATACATGATTCGAACCGAAGGCTTCTTTTCTTTATACAAGGGTTTAGTGCCATCACTGCTAAGCATGGCTCCTTCTAGTGCAGTCTTTTATGGTGTATACGATATGCTAAAATCAGCATATCTGCATTCACCTGAAGGAATGCAAAGAATCCAGAATATGCATAAACAGGGGCAGGATCATGAACTGAGTGCTTTTGATCAGCTTGAGTTGGGGCCAGTAAGGACGTTGTTGTATGGGGCTATTGCTGGTGCATGTGCAGAAGCTGCTACATACCCATTTGAAGTGGTGAGGAGGCGACTTCAATTGCAGGTCCAGTCTACTAAATTAAGTTCTTTAGCGACTTTTGTCAAAATAGTGGAACAAGGTGGCATTTCAGCTCTTTATGCAGGACTTATTCCCAGCTTATTACAGGTACTTCCTTCGGCATCAATTAGTTACTTTGTGTATGAGTTTATGAAGATTGTTCTCAAAGTAGAGAAGTAG 1254 0.4258 MTMLEPNNNSLPIFFNPSFDFGTGGLFLETTIPDSFVRFISLRIPLTASSESNLHRRQRRSVKAVGCFLSVSLPSSTNLPANSKPYVLQDGEHVSDKDTALDGVVSHKKIRARERGAVNTTKHLWAGAISAMVSRTCVAPLERLKLEYIVRGEKRNIFELIKSIATSQGLRGFWKGNLLNILRTAPFKAVNFSAYDTYRKQLLRFSGNEETTNFERFIAGAAAGVTATTICLPLDTIRTTIVAHGGEAFGGVIGAFQYMIRTEGFFSLYKGLVPSLLSMAPSSAVFYGVYDMLKSAYLHSPEGMQRIQNMHKQGQDHELSAFDQLELGPVRTLLYGAIAGACAEAATYPFEVVRRRLQLQVQSTKLSSLATFVKIVEQGGISALYAGLIPSLLQVLPSASISYFVYEFMKIVLKVEK 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02124 417 PRINTS Mitochondrial carrier protein signature 123 136 IPR002067 GO:0055085
Tsu03g02124 417 PRINTS Mitochondrial carrier protein signature 176 196 IPR002067 GO:0055085
Tsu03g02124 417 PRINTS Mitochondrial carrier protein signature 136 150 IPR002067 GO:0055085
Tsu03g02124 417 PRINTS Mitochondrial carrier protein signature 226 244 IPR002067 GO:0055085
Tsu03g02124 417 PRINTS Mitochondrial carrier protein signature 269 287 IPR002067 GO:0055085
Tsu03g02124 417 PRINTS Mitochondrial carrier protein signature 336 358 IPR002067 GO:0055085
Tsu03g02124 417 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 21 416 - -
Tsu03g02124 417 ProSiteProfiles Solute carrier (Solcar) repeat profile. 327 412 IPR018108 -
Tsu03g02124 417 ProSiteProfiles Solute carrier (Solcar) repeat profile. 118 201 IPR018108 -
Tsu03g02124 417 ProSiteProfiles Solute carrier (Solcar) repeat profile. 211 296 IPR018108 -
Tsu03g02124 417 PANTHER SOLUTE CARRIER FAMILY 25 21 416 - -
Tsu03g02124 417 SUPERFAMILY Mitochondrial carrier 117 409 IPR023395 -
Tsu03g02124 417 Pfam Mitochondrial carrier protein 327 414 IPR018108 -
Tsu03g02124 417 Pfam Mitochondrial carrier protein 211 298 IPR018108 -
Tsu03g02124 417 Pfam Mitochondrial carrier protein 118 203 IPR018108 -
Tsu03g02124 417 Gene3D Mitochondrial carrier domain 114 416 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02124 Tsu-Chr3 22609146 22618580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02124 196 410 Organic Solute Cotransporters AT5G64970 20.000 3.53e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02124 - - gmx:100812227 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02124 03 22609146 22618580 Tsu03g02124 03 22609146 22618580 ECH