Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02121 ATGGCTGGTGGGATTCTTCCTGTGGATAGTACACCAGTTTCTGCCATCAATATTGGTGGCAAGTTAACACTCTCAATCATTATTACCTGCATAGTTGCAGCATCCGGTGGCCTTCTTTATGGATATGATCTCGGAGTTTCagggggtgtTACAACGATGGTTCCATTTCTTGAAAAATTCTTTCCAGATATTCTAAGAAAGGCGGCTAGTACCGAAGTGAATATGTATTGTGTGTATGATAGTCAAGTCTTGACATTATTCACATCATCTCTTTATCTAGCTGGATTAGTCTCATCCCTTGCAGCTAGCAAAGTCACAGCGGTATATGGTCGGAGAAACGTCATCATAATAGGTGGTGCTCTGTTCCTTGCCGGGGGTGCCATTAATGGTGGTGCGGAAAATATTCCCATGCTCATTTTGGGTCGGGTTCTTCTCGGGTTGGGGGTCGGATTCACAAATCAAGCTGCACCATTGTACCTATCTGAAACTGCTCCTCCAAAATGGCGAGGTAGTTTTAGCACAGGCTTTCAATTCTTCTTGGGAATCGGCGTCGTCGCCGCAGGCTGCATAAACTACGCCACCTCTAAACATACATGGGGATGGAGACTCTCTCTTGGACTTGCAGTAGTGCCTGCAATTGTGATGACAATTGGTTCCTTCCTCATAACTGACACACCAAATAGTTTGGTAGAACGTGGTAAGATTCAGCAAGCCAGAATAGCCTTACGCAAAATCAGAGGATCCTCCGTTGATATTGAACCCGAGTTAGAAGAACTTATTAAGTGGACAGAAGTTGCAAAATCAGTAAAACAAGAACCCTTTAAGACCATATTCAAAAGGGAGTATCGACCTCACTTGGTGATGGCATTTGCAATTCCATTTTTTCAACAACTTACAGGAATCAACATTGTCGCTTTTTATTCACCCAACCTCTTTCAATCTATTGGTTTGGGACACGACGGCGCTTTGATTTCTTCCATTATACTTGGATCTGTTAGCCTTACTTCCAACCTTATCTCTGCCGGTATTGTTGATCGATTTGGTCGaagatttttgtttataaccgGAGGAATTATGATGCTTGTCAACTTGATTGCTGTGGCAATTGTGCTAGCAGTGGTGAGTGGTGTTGATGGTTCAAAAGACATATCAAAGGGCAATGCAATATTGGTATTGGTGCTATTGTGTCTCTACACTGCTGGTTTTGGTTGGTCATGGGGACCTCTAACATGGCTAATTCCAAGTGAGATTTTCCCAGTAAATATAAGAACAACTGGACAAAGCATAGCTGTTGCTGTACaattcataataatatttgtCTTATCACAAACATTTTTGACAATGTTATGTCACTTTAAGTTTGGAGCATTTGTGTTCTATGCTTTTTGGGTTTCAGTGATGACTTTATTTATAATCTTCTTCTTGCCTGAGACTAAAGGAATTCCTTTGGAGTCTATGTACACTATATGGGGTAAACATTGGTTTTGGTATCGGTTTGTTAAAGGAGAAGAAGGTCAAGAAATCATCCATGAGTGA 1536 0.4056 MAGGILPVDSTPVSAINIGGKLTLSIIITCIVAASGGLLYGYDLGVSGGVTTMVPFLEKFFPDILRKAASTEVNMYCVYDSQVLTLFTSSLYLAGLVSSLAASKVTAVYGRRNVIIIGGALFLAGGAINGGAENIPMLILGRVLLGLGVGFTNQAAPLYLSETAPPKWRGSFSTGFQFFLGIGVVAAGCINYATSKHTWGWRLSLGLAVVPAIVMTIGSFLITDTPNSLVERGKIQQARIALRKIRGSSVDIEPELEELIKWTEVAKSVKQEPFKTIFKREYRPHLVMAFAIPFFQQLTGINIVAFYSPNLFQSIGLGHDGALISSIILGSVSLTSNLISAGIVDRFGRRFLFITGGIMMLVNLIAVAIVLAVVSGVDGSKDISKGNAILVLVLLCLYTAGFGWSWGPLTWLIPSEIFPVNIRTTGQSIAVAVQFIIIFVLSQTFLTMLCHFKFGAFVFYAFWVSVMTLFIIFFLPETKGIPLESMYTIWGKHWFWYRFVKGEEGQEIIHE 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02121 511 Pfam Sugar (and other) transporter 30 490 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tsu03g02121 511 CDD MFS_STP 32 477 IPR044778 GO:0015145|GO:0015749
Tsu03g02121 511 ProSitePatterns Sugar transport proteins signature 1. 340 357 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu03g02121 511 PRINTS Sugar transporter signature 392 413 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu03g02121 511 PRINTS Sugar transporter signature 296 306 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu03g02121 511 PRINTS Sugar transporter signature 139 158 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu03g02121 511 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu03g02121 511 PRINTS Sugar transporter signature 415 427 IPR003663 GO:0016020|GO:0022857|GO:0055085
Tsu03g02121 511 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 3 504 IPR045262 GO:0015144
Tsu03g02121 511 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 479 IPR020846 GO:0022857
Tsu03g02121 511 ProSitePatterns Sugar transport proteins signature 2. 144 169 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu03g02121 511 Gene3D MFS general substrate transporter like domains 15 493 IPR036259 -
Tsu03g02121 511 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER, MAJOR FACILITATOR SUPERFAMILY-RELATED 3 504 - -
Tsu03g02121 511 SUPERFAMILY MFS general substrate transporter 31 485 IPR036259 -
Tsu03g02121 511 TIGRFAM SP: MFS transporter, sugar porter (SP) family 24 485 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02121 Tsu-Chr3 22560097 22564718 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02121 53 501 Organic Solute Cotransporters AT1G34580 60.619 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02121 K24193 - gmx:100799418 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02121 03 22560097 22564718 Tsu03g02121 03 22560097 22564718 ECH