Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02094 ATGGCAGCTGAAGTATGTCACCATGCTATTGGGACTTTGCAGTCTCATTCTTATCTTAGTAATTTGAATCAGCATCAAAATCTCAGGAGCAATTCACTAAGATTGGTGACAAAGGATTTTAGCTGTATTAATGGCTTGTCGAAGGGAAGAAGTAGTCACTTTGGCCACAGGAATTGTATTGTTACTCGATCTTCGGCTACTCATTCTCAGACGTCGGTTGTTGATCCGGTATTGTCTCCTTCAAGAAACAACACCAGTGACACTACCAAGAAATCAAATGAAGCAGCTTTGATCCTTATTCGACATGGTGAGTCGTTGTGGAATGAGAAGAATTTGTTCACAGGCTGTGTGGATGTACCTCTTAGCAAAAAGGGTATAGATGAGGCAATTGAAGCCGGAAAAAGAATTAGTAGCATTCCAGTTGATCTCATATTTACATCTGCTTTGATTCGTGCACAAATGACTGCCATGCTTGCCATGACCCAGCACCGCCGTAAGAAGGTGCCTATCGTTATGCACAATGAGAGTGAACAAGCAAAGGCATGGAGTCAAGTTTTTAGCGAAGATACAAAAAAGCAGTCCATTCCAGTCATAGCAGCTTGGCAACTAAATGAAAGAATGTATGGAGAACTACAGGGTCTCAATAAACAAGAAACAGCAGACAGATACGGGAAAGAACAAGTCCATGAGTGGCGTCGAAGCTATGACATTCCACCTCCCAATGGTGAAAGTTTGGAAATGTGTGCAGAAAGAGCAGTTGCCTATTTCAGAGACCAGATTGAACCCCAACTTTTATCTGGAAAGAATGTTATGATTGCGGCACATGGGAATTCTTTGAGATCCATTATCATGTATCTCGATAAATTAACTTCCCAGGAGGTCATTAGTTTAGAACTGTCGACTGGAATTCCAATGCTATACATTTCCAAAGAGGGAAGGTTCATTAGGAGGGGGAGTCCCATAGGACCAACTGAAGCTGGAGTTTATGCCTATACCAAGCGTTTGGCTCTTTACAAGCAGAAGTTGGATGAGAtgttctaa 1041 0.4179 MAAEVCHHAIGTLQSHSYLSNLNQHQNLRSNSLRLVTKDFSCINGLSKGRSSHFGHRNCIVTRSSATHSQTSVVDPVLSPSRNNTSDTTKKSNEAALILIRHGESLWNEKNLFTGCVDVPLSKKGIDEAIEAGKRISSIPVDLIFTSALIRAQMTAMLAMTQHRRKKVPIVMHNESEQAKAWSQVFSEDTKKQSIPVIAAWQLNERMYGELQGLNKQETADRYGKEQVHEWRRSYDIPPPNGESLEMCAERAVAYFRDQIEPQLLSGKNVMIAAHGNSLRSIIMYLDKLTSQEVISLELSTGIPMLYISKEGRFIRRGSPIGPTEAGVYAYTKRLALYKQKLDEMF 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02094 346 Pfam Histidine phosphatase superfamily (branch 1) 192 299 IPR013078 -
Tsu03g02094 346 Pfam Histidine phosphatase superfamily (branch 1) 97 168 IPR013078 -
Tsu03g02094 346 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 99 108 IPR001345 GO:0003824
Tsu03g02094 346 PANTHER PHOSPHOGLYCERATE MUTASE 1 345 IPR005952 GO:0004619|GO:0006096|GO:0016868
Tsu03g02094 346 MobiDBLite consensus disorder prediction 71 90 - -
Tsu03g02094 346 SMART PGAM_5 96 282 IPR013078 -
Tsu03g02094 346 Gene3D - 86 320 IPR029033 -
Tsu03g02094 346 CDD HP_PGM_like 97 307 IPR013078 -
Tsu03g02094 346 Hamap 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 94 321 IPR005952 GO:0004619|GO:0006096|GO:0016868
Tsu03g02094 346 SUPERFAMILY Phosphoglycerate mutase-like 97 313 IPR029033 -
Tsu03g02094 346 PANTHER PHOSPHOGLYCERATE MUTASE 1, HISTIDINE PHOSPHATASE SUPERFAMILY-RELATED 1 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02094 Tsu-Chr3 22116767 22119722 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02094 K01834 - gmx:100802621 594.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02094 03 22116767 22119722 Tsu03g02094 03 22116767 22119722 ECH