Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02084 ATGATGTTAGGAAAAAGACCTCGTCCTCCAATGAAAAGAACAACAAGCATGTCAGAAATAACCTTCGATCTGAACACAGTAATTACTGCAGAGGATGATCCAAACAACAACCTTCATGGACCTGCAGGTGTTGGTCCGTTCGGTCTATATCCACCAACTTCTCCAGGAATCAACGGTTCAGATCAGAGCAGAGTTTTGTCCACAGTTTCACCTAGAAATCATAGAAGAAATTCCTCTGACATGACTCACCCTGATTTCTTGCGCTCTTGTTTTCTCTGTAAACGCCGTTTGGTTCCTGGCCGTGACATCTACATGTACAAGGGAGATAGTTGTTTTTGCAGTCTAGAGTGTCGTCAACAGCAGATGAATCAAGATGAGAAGAAAGATAAGTGTTGTGTGGTATCATCAAAGAAAAAACTTGTGGTTGTGGCTGGGTCACAAGTTGCCACAAATTTGTAA 459 0.4227 MMLGKRPRPPMKRTTSMSEITFDLNTVITAEDDPNNNLHGPAGVGPFGLYPPTSPGINGSDQSRVLSTVSPRNHRRNSSDMTHPDFLRSCFLCKRRLVPGRDIYMYKGDSCFCSLECRQQQMNQDEKKDKCCVVSSKKKLVVVAGSQVATNL 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02084 152 MobiDBLite consensus disorder prediction 51 80 - -
Tsu03g02084 152 PANTHER - 1 147 - -
Tsu03g02084 152 Pfam zinc-finger of the FCS-type, C2-C2 77 128 IPR007650 -
Tsu03g02084 152 ProSiteProfiles Zinc finger FLZ-type profile. 85 129 IPR007650 -
Tsu03g02084 152 PANTHER FCS-LIKE ZINC FINGER 5 1 147 - -
Tsu03g02084 152 MobiDBLite consensus disorder prediction 55 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02084 Tsu-Chr3 22042790 22044196 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02084 - - aprc:113852663 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02084 03 22042790 22044196 Tsu03g02084 03 22042790 22044196 ECH