Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02053 ATGGAAGAAGGTTCCGAATACATCGATATCAACCTATCTCCGGTGAAGCTTCCACTGGATCTTCCTCAAGATCCACCGCTCAAATCTAACCGCCGTCTTCGCCGTAGAGGCGACACTTGGGTGATATCTGTGTTGGTAATAATCCACATCGGGTTTTTCATAGCGACGATGCTGGTTAACGATTGCTTCACCAATTCTCACGGTGATTGCACTTTTCCATCTCTCGGAAGGTTATCGTTTCAGCCTCTATCTGAAAATCCGTTGTTAGGTCCTTCCATGTCCAAGTTGGATGAAATGGGAGCTCTTCGAAAGAACTTTTTGACGGAACATCATCAAACATGGCGTCTTTTCATGTTTCCATTTTTGCACGCTGGACTCTTCCATCTTGTTATCAATCTCTGCAGTGTCATCTATGTTGGAATTCACCTAGAGCAGGAGTTTGGGCCATTAAGGATTGGTATAATCTATATACTATCTGCTTTTGTGGGTGCCTTAATGGCTTCTCTTTTTCTTCGAAACATCCCTGCTGTTGGTGCTTCTGGCGCTTTATATGGATTACTAGGAACATTGCTTGCAGAACTTGTATGGAACTGGAAATTTCATAACAATAAGATTTCAGAAATAGCTTCATTAGTCTTTGTCTTTGTGTGCAACTTCTTGCTTGGTTTTCTGCCTTATGTAGACAATTTTTCAAGCATTGGAGGTTTTATATCAGGATTCCTTCTTGGAACTGTTCTATTATTCGCCCCTCAGTTCCAACAAATAGCTCCAAGTAAAGGCGATCAAATTGATTACAGTCTCAAAAGTTATATCAAGTTGAAGTTCAAGCAAAAGCTTGACAGACCAGTTACTAGGATTGTTTCTTTTATCCTCTTCACCCTGCTATTGGCTGGTTTTCTTGTTGCAGTTCTTTATGGAATCAACATCAACAGTTATTGCACATGGTGTCCATATGTTGACTGTATCCCTTCCACAAGCTGGCACTGCAAAGACAGAGAAACCTTTTGTGAGACAATGGTGAGTAATGCTCACTTGACGATGACATGTTTGGGGACTGGCAACTTTAAGGTCTTTCATTACACCAACATATCTCGAGCAAGGATTAATGATTTGTGCAATTTAATATGTTGA 1131 0.4085 MEEGSEYIDINLSPVKLPLDLPQDPPLKSNRRLRRRGDTWVISVLVIIHIGFFIATMLVNDCFTNSHGDCTFPSLGRLSFQPLSENPLLGPSMSKLDEMGALRKNFLTEHHQTWRLFMFPFLHAGLFHLVINLCSVIYVGIHLEQEFGPLRIGIIYILSAFVGALMASLFLRNIPAVGASGALYGLLGTLLAELVWNWKFHNNKISEIASLVFVFVCNFLLGFLPYVDNFSSIGGFISGFLLGTVLLFAPQFQQIAPSKGDQIDYSLKSYIKLKFKQKLDRPVTRIVSFILFTLLLAGFLVAVLYGININSYCTWCPYVDCIPSTSWHCKDRETFCETMVSNAHLTMTCLGTGNFKVFHYTNISRARINDLCNLIC 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02053 376 Gene3D - 34 249 IPR035952 -
Tsu03g02053 376 PANTHER RHOMBOID-RELATED 27 376 IPR002610 GO:0004252|GO:0006508|GO:0016021
Tsu03g02053 376 SUPERFAMILY Rhomboid-like 37 251 IPR035952 -
Tsu03g02053 376 Pfam Rhomboid family 109 247 IPR022764 GO:0004252|GO:0016021
Tsu03g02053 376 PANTHER RHOMBOID-LIKE PROTEIN 8 27 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02053 Tsu-Chr3 21610577 21613895 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02053 - - gmx:100793747 570.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02053 03 21610577 21613895 Tsu03g02053 03 21610577 21613895 ECH