Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02018 ATGCGCCAATCACTTCTCTCTAACCACAACAACAACTCCGATAAGCCACAACCGTCACCGGTTATTGTCACCGGCCGTAGTAGCCGGAGAGTTTCACCAACAAGCATAGCAATCGAAACTAAAAAAAGCCTCTTACAAAACGGTGATTCTTACATGGGAAGTTTCTCCGGTAACGTACCAAACGGATCGGGGAAATATGCATGGAAAGATGGATGTATCTACGAAGGAGAATGGAAAAAAGGAAAAGCTTCCGGTAAAGGAAATTTCTCATGGCCTTCTGGAGCTATCTATATAGGCGAATTTAAATCAGGTCGAATGGAAGGTTCTGGAACTTTTACAGGATCTGACGGAGATGTTTACAGTGGTTCATGGATTTCTGATAGAAAAAACGGTTACGGAAAAAAGCGTTACGTTAACGGTGATTATTATGAAGGTTGTTGGAAACAGAATATTCAAGATGGACATGGAAGGTATGTTTGGAATAACGGAAATGAGTATATTGGTGAATGGAAAAACGGTGTTATTAACGGAAGAGGAACGCTTATTTGGTCGAATGGGAATCGATATGAAGGCGAATGGGAGAACGGTGTAACGAAAGGGCAAGGTGTTTTTACTTGGCCTGATGGAAGTTGTTATGTTGGGAATTGGAATAATAGTGATGTGAAAATGCATTTGTTGAATGGAACTTTTTATCCTGGTGATGATTTTGCTATAACAATGAGGAAAAAATCTTCTGTTGAAGTTGAAGGTGAAAAGAATTTTAGGAAGATTTGTATTTgggaatctgatggtgaagctGGTGATATAACTTGTGATATAGTTGATAATGTGTCGGTTTTGAATAGGATTGGTAGTGAAACTGTTTCAGATCCACAAGAGATTAAGCAGCTTCAGTTTAATCCGAATTGTTTTGCTTCCGAGGTTAAGAGACCGGGTGAAACTATATCGAAAGGGCATAAGAATTATGATCTTATGCTTAATTTGCAATTGGGAATAAGGCACTCTGTTGGAAAGGAAGCTTCTATAACGCGAGAGCTAAAACCGAGTGATTTTGATCCGAAGGAGAAGTTTTGGACTAGGTTTCCTTCTGAAGGGTCTAAGATTACGCCACCACATCAATCGATGGAGTTCCGTTGGAAGGACTACTGCCCTATGGTTTTTAGACAATTGAGGAAACTATTTCAGGTGGATCCTGCGGAATACATGTTAGCTATATGCGGGAACGCTGCCCTCAGGGAGCTTTCATCTCCTGGCAAAAGTGGAAGCTTCTTCTACTTGACCCAAGATGACAGATTTATGATAAAGACAGTGAAAAAATCTGAAGTCAAGGTACTTATTCGGATGCTTCGAAGTTATTACCAACATGTTTCTCAGTACGAGAATTCGCTTGTGACAAAATTCTATGGGGTACATTGTGTCAAACCAATTGGTGGCCAGAAGACCCGGTTCATTGTGATGGGCAATCTTTTCTGCTCAGAATATCCAATCCATAGACGATTTGACTTGAAGGGATCGTCACATGGCCGTGCAACAGATAAGACTgaagaggagattgatgaaaCTACCACCCTCAAGGACTTGGATCTCAATTTTGTATTTCGCCTGCAAAGCAATCAGTACAAGGATCTCATCAAGCAAATTGAGCGGGATTGCGAGTTTTTGGAAGCCGTGGGGATTATGGATTATAGTCTTTTGGTCGGCATGCATTTTCGTGATGATAATACAGTTGACAAAATGGGACTGTCACCGTTTCTTTTGCGCACTGGCAAGCAGGACTCTTATCAGAGTGAAAAGTTTATGCGTGGTTGTCGCTTCCTTGAAGCAGAGCTACAGGATAGGGATCGAATCAAATCTGGCCGGTATGTTGAAATGTTTCTGGTTCTCTGA 1887 0.4033 MRQSLLSNHNNNSDKPQPSPVIVTGRSSRRVSPTSIAIETKKSLLQNGDSYMGSFSGNVPNGSGKYAWKDGCIYEGEWKKGKASGKGNFSWPSGAIYIGEFKSGRMEGSGTFTGSDGDVYSGSWISDRKNGYGKKRYVNGDYYEGCWKQNIQDGHGRYVWNNGNEYIGEWKNGVINGRGTLIWSNGNRYEGEWENGVTKGQGVFTWPDGSCYVGNWNNSDVKMHLLNGTFYPGDDFAITMRKKSSVEVEGEKNFRKICIWESDGEAGDITCDIVDNVSVLNRIGSETVSDPQEIKQLQFNPNCFASEVKRPGETISKGHKNYDLMLNLQLGIRHSVGKEASITRELKPSDFDPKEKFWTRFPSEGSKITPPHQSMEFRWKDYCPMVFRQLRKLFQVDPAEYMLAICGNAALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLRSYYQHVSQYENSLVTKFYGVHCVKPIGGQKTRFIVMGNLFCSEYPIHRRFDLKGSSHGRATDKTEEEIDETTTLKDLDLNFVFRLQSNQYKDLIKQIERDCEFLEAVGIMDYSLLVGMHFRDDNTVDKMGLSPFLLRTGKQDSYQSEKFMRGCRFLEAELQDRDRIKSGRYVEMFLVL 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02018 628 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 316 628 IPR002498 GO:0016307|GO:0046488
Tsu03g02018 628 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 23 620 - -
Tsu03g02018 628 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 307 488 IPR027484 -
Tsu03g02018 628 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 46 163 - -
Tsu03g02018 628 Pfam MORN repeat 120 141 IPR003409 -
Tsu03g02018 628 Pfam MORN repeat 97 119 IPR003409 -
Tsu03g02018 628 Pfam MORN repeat 51 72 IPR003409 -
Tsu03g02018 628 Pfam MORN repeat 189 210 IPR003409 -
Tsu03g02018 628 Pfam MORN repeat 74 94 IPR003409 -
Tsu03g02018 628 Pfam MORN repeat 166 188 IPR003409 -
Tsu03g02018 628 Pfam MORN repeat 143 164 IPR003409 -
Tsu03g02018 628 MobiDBLite consensus disorder prediction 1 33 - -
Tsu03g02018 628 Gene3D - 489 602 - -
Tsu03g02018 628 SUPERFAMILY SAICAR synthase-like 317 596 - -
Tsu03g02018 628 Coils Coil 537 557 - -
Tsu03g02018 628 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 406 588 IPR002498 GO:0016307|GO:0046488
Tsu03g02018 628 Gene3D - 173 231 - -
Tsu03g02018 628 Gene3D - 41 80 - -
Tsu03g02018 628 Gene3D - 81 125 - -
Tsu03g02018 628 Gene3D - 126 172 - -
Tsu03g02018 628 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 138 219 - -
Tsu03g02018 628 SMART PIPK_2 347 585 IPR002498 GO:0016307|GO:0046488
Tsu03g02018 628 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 23 620 IPR023610 -
Tsu03g02018 628 SMART morn 164 185 IPR003409 -
Tsu03g02018 628 SMART morn 187 208 IPR003409 -
Tsu03g02018 628 SMART morn 49 70 IPR003409 -
Tsu03g02018 628 SMART morn 141 162 IPR003409 -
Tsu03g02018 628 SMART morn 72 93 IPR003409 -
Tsu03g02018 628 SMART morn 95 116 IPR003409 -
Tsu03g02018 628 SMART morn 118 139 IPR003409 -
Tsu03g02018 628 CDD PIPKc_AtPIP5K_like 321 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02018 Tsu-Chr3 20920103 20923257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02018 27 620 Acyl Lipid Metabolism Gene Families AT1G77740 72.259 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02018 K00889 - gmx:100813118 1008.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02018 03 20920103 20923257 Tsu03g02018 03 20920103 20923257 ECH