Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02015 ATGTTGTTACAGAATCCTGTGTCAACAGCATCATTGTTATTAGCCGCCTCAAGGAGGGTTTACAACTACCATCTTTCTACATATACACTCATGGCATCCTCAGTTGTGGACTGCAGTTCGCTGGTTCTATGTGGCAAATCACTCACAGAGAATGAAACTGCTAAAGCTATTAAGGCAAATAACACCCTCAAGCTCTCTGACAAGGGAGAATTGTCCATTATTTTGCTTTCAGAATTCAATAAAAATGTTATGCAACAACAGTCCTTCCAATTTAGTTCCTTCATGAATTCTCTTTCCACCAATCAATTTGGCAGGCTTCTCATATGGTCTCCACAGTTATCTTCGACACATGATGTCATATCACAGAACTTTTGTGAACTTCCGGTTGGTACAGTATGTGTTGCAGATATTCAGAACAAAGGACGAGGTCGGTCAAAGAATGTTTGGGAGTCTCCATTAGGTTGCCTCATGTTTTCTTTTACTTTGCAAATGGAGGATGGACGGGTCGTTCCTTTAGTTCAGTATGTTGTTTCCTTGGCTATCACAGAGGCAATCAAGGATATCTGTGACAAAAATGGATTACCGTGCATTGATGTTAAGATCAAGTGGCCAAATGATCTATACTTAAATGGATTTAAAGTTGGAGGCATTCTGTGCACCTCAACATATAAATCAAAAAAGTTCAATATCAGTGCAGGAATAGGATTGAATGTCAATAATGAGAAGCCAACAACATCCTTGAATACAGTTCTAAGAGAATTGTCTGTGGGAGCTTACCAATTTCAAAGAGAAGATGTTCTGGCAGCCTTTTTTAACAAGTTTGAGAAGTTTTTTGATCTATTTCAGAATCAAGGTACTGTGGGAATTTCTTATGAGATTGATCCAAATGTATGTTGTGTGGAAAGGGAAAAAGGGATTTATCATAGGGAACAGGATACACCAGTGCAgtatataattgaaaattgcTTGCTTATTTACCAGGCACAAAACTTCATAATCCTCTATTTCCCCTTTGCCAGGttgaattattttctttcttttttatggtTGTGCAATTTCTTGTAA 1065 0.37 MLLQNPVSTASLLLAASRRVYNYHLSTYTLMASSVVDCSSLVLCGKSLTENETAKAIKANNTLKLSDKGELSIILLSEFNKNVMQQQSFQFSSFMNSLSTNQFGRLLIWSPQLSSTHDVISQNFCELPVGTVCVADIQNKGRGRSKNVWESPLGCLMFSFTLQMEDGRVVPLVQYVVSLAITEAIKDICDKNGLPCIDVKIKWPNDLYLNGFKVGGILCTSTYKSKKFNISAGIGLNVNNEKPTTSLNTVLRELSVGAYQFQREDVLAAFFNKFEKFFDLFQNQGTVGISYEIDPNVCCVEREKGIYHREQDTPVQYIIENCLLIYQAQNFIILYFPFARLNYFLSFLWLCNFL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02015 354 TIGRFAM birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 110 292 IPR004408 GO:0004077|GO:0036211
Tsu03g02015 354 PANTHER HOLOCARBOXYLASE SYNTHETASE (BIOTIN-(PROPRIONYL-COA-CARBOXYLASE (ATP-HYDROLYSING)) LIGASE) 46 285 - -
Tsu03g02015 354 SUPERFAMILY Class II aaRS and biotin synthetases 94 286 IPR045864 -
Tsu03g02015 354 CDD BPL 107 281 IPR004408 GO:0004077|GO:0036211
Tsu03g02015 354 PANTHER BIOTIN PROTEIN LIGASE 46 285 - -
Tsu03g02015 354 Pfam Biotin/lipoate A/B protein ligase family 111 237 IPR004143 GO:0036211
Tsu03g02015 354 ProSiteProfiles Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL) catalytic domain profile. 92 282 IPR004143 GO:0036211
Tsu03g02015 354 Gene3D Bira Bifunctional Protein; Domain 2 95 292 IPR045864 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02015 K01942 - gmx:100818402 432.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02015 03 20872397 20879964 Tsu03g02015 03 20872397 20879964 ECH