Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02008 ATGTTATCTGGAATTCTATTTCAGATTTTTTATGGATTAATGGGAAGTTGGACTGCTTACATTATTAGTGTTCTTTATGTTGAATATAGAACtagaaaagaaagagagaaagttGATTTCAGAAACCATGTTATTCAGTGGTTTGAAGTTCTTGATGGACTTTTAGGAAAACATTGGAGGAATCTTGGTCTATTTTTCAATTGCACTTTCCTTTTGTTTGGATCAGTAATTCAGCTAATTGCTTGTGCAAGTAACATATATTACATAAATGATCATTTGGACAAGAGAACTTGGACATATATCTTTGGAGCTTGTTGTGCCACAACAGTTTTCATTCCTTCTTTCCACAACTACAGAATCTGGTCATTTTTAGGCTTAGTGATGACTACTTACACTGCATGGTATATGACCATAGCTTCCATTGCTCATGGACAGGCCGAGGATGTGAAGCACTCTGGCCCAACCAAATTGGTTCTGTACTTCACAGGAGCTACCAACATTCTCTATACCTTTGGTGGACATGCTGTTACAGTGGAAATTATGCATGCAATGTGGAAGCCACAAAAGTTTAAGATGATATATCTAATTGCAACATTATATGTGATGACATTAACTTTGCCATCAGCAGCAGCAGTATATTGGGCATTTGGAGACAATCTTCTTACTCATTCCAATGCTCTCTCATTGCTTCCTAGGACAGGGTTTAGAGATACAGCTGTTGTTCTCATGCTCATTCATCagtttaTTACATTTGGATTTGCTTGCACACCTTTATATTTTGTCTGGGAGAAATTTCTTGGAGTGCATGAAACAAAAAGTTTGTTCAAAAGAGCATTGGTTAGGCTTCCAGTTGTGATTCCAATATGGTTCTTGGCAATAATATTTCCATTCTTTGGTCCAATTAATTCAACTGTTGGATCTCTCTTGGTTAGCTTCACTGTTTACATAATTCCTGCCTTGGCACACATGATCACCTTTGCTTCAGCACCAGCTAGAGagAATGCTGTGGAGAGACCACCATCATTTTTAGGAGGTTGGGTAGGATTATACTCAGTGAATGTCTTTGTTGCTGTATGGGTTTTGGTGGTAGGATTTGGATTGGGGGGATGGGCAAGTATGCTTAATTTTGTACACCAAGTTAAAACATTTGGTTTATTTGCTAAGTGTTATCAATGTCCCCCTCACAAGGCCTAA 1194 0.3719 MLSGILFQIFYGLMGSWTAYIISVLYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNLGLFFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLVMTTYTAWYMTIASIAHGQAEDVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKMIYLIATLYVMTLTLPSAAAVYWAFGDNLLTHSNALSLLPRTGFRDTAVVLMLIHQFITFGFACTPLYFVWEKFLGVHETKSLFKRALVRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMITFASAPARENAVERPPSFLGGWVGLYSVNVFVAVWVLVVGFGLGGWASMLNFVHQVKTFGLFAKCYQCPPHKA 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02008 397 Pfam Transmembrane amino acid transporter protein 1 361 IPR013057 -
Tsu03g02008 397 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 3 1 392 - -
Tsu03g02008 397 PANTHER OS05G0424000 PROTEIN-RELATED 1 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02008 Tsu-Chr3 20782327 20786349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02008 1 396 Organic Solute Cotransporters AT1G77690 87.879 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02008 K13946 - gmx:100816267 768.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02008 03 20782327 20786349 Tsu03g02008 03 20782327 20786349 ECH