Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g02001 ATGGAAATCAAAAGAGTACAAACATTGGCTTTTAACCAATTGAAGGAACTTCCACCACAATTCATTCGTTCAGAGAATGAAATGCCAAAGAATACCAAGGCCTTGGAAGGTGTTAATGTTCCTATAATCTCATTATCTCAACCACATAATCTTTTAGTGAAAAAAATCACTCAAGCTGCTTCTGAGTGGGGTTTCTTTGTTATCACTGACCATAATATATCTCCAAAACTTATTCAAAATTTGCAAGATGTGGGCCATGAGTTCTTTTCTCTTCCTCAAAAGGAAAAAGAGATATATGCAAATGACCCATCTAGTGGTAAATTTGAGGGCTATGGAACTAAGATGACCAAGAACTTAGAAGAAAAAGTTGAATGGTTAGATTATTATTTTCATCTCATGTCTCCTCCTTCGAAGGTGGATTATGAGATGTGGCCTAAAAGTCCTCCTTCGTACAGGGAAGTAGTAGAAGAATACAATAAAGAGATTTTAAGTGTGACAAACAATATTTTGGAGCTTTTGTCTAAAGGGCTAGAATTGGAGAGTAAGACTTTAAAGTCTTGTTTGGGAGGTGAAGAAATAGAATTAGAAATGAAGATAAATATGTATCCACCATGTCCACAACCTGAATTGGCATTAGGAGTTGAGGCCCACACTGATATGTCTGCCCTTACCATACTTGTTTCAAATGATGTTCCTGGCCTTCAAGTTTGGAAGGACAATAATTGGGTTGCAGTAAATTACTTACAAAATGCTCTCTTTGTGCACATTGGTGACCAACTTGAGGTGTTGAGCAATGGGAAGTATAAGAGTGTTTTGCACAGAAGCTTGGTGAACAAGGAACGCAAACGCATGTCGTGGGCCGTGTTTATTACTCCTCCACACGAGGTCGTGGTTGGACCTCTTCCTCAGCTCGTCAATGATCAAAATCCAGCCAgattttcaacaaaaacttATGCTGAGTATCGCTATCGCAAATTCAACAAGATTCCCCAATAg 996 0.3795 MEIKRVQTLAFNQLKELPPQFIRSENEMPKNTKALEGVNVPIISLSQPHNLLVKKITQAASEWGFFVITDHNISPKLIQNLQDVGHEFFSLPQKEKEIYANDPSSGKFEGYGTKMTKNLEEKVEWLDYYFHLMSPPSKVDYEMWPKSPPSYREVVEEYNKEILSVTNNILELLSKGLELESKTLKSCLGGEEIELEMKINMYPPCPQPELALGVEAHTDMSALTILVSNDVPGLQVWKDNNWVAVNYLQNALFVHIGDQLEVLSNGKYKSVLHRSLVNKERKRMSWAVFITPPHEVVVGPLPQLVNDQNPARFSTKTYAEYRYRKFNKIPQ 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g02001 331 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 331 - -
Tsu03g02001 331 SUPERFAMILY Clavaminate synthase-like 3 329 - -
Tsu03g02001 331 Pfam 2OG-Fe(II) oxygenase superfamily 199 292 IPR044861 -
Tsu03g02001 331 Pfam non-haem dioxygenase in morphine synthesis N-terminal 40 145 IPR026992 -
Tsu03g02001 331 Coils Coil 155 175 - -
Tsu03g02001 331 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 193 292 IPR005123 -
Tsu03g02001 331 Gene3D - 1 329 IPR027443 -
Tsu03g02001 331 PANTHER FLAVONOL SYNTHASE/FLAVANONE 3-HYDROXYLASE-LIKE 3 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g02001 Tsu-Chr3 20721005 20722261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g02001 6 328 Glycosyltransferase AT5G59530 30.655 6.29e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g02001 K05278 - gmx:100810937 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g02001 03 20721005 20722261 Tsu03g02001 03 20721005 20722261 ECH