Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01992 ATGTCCACCACAGCTGAGACTGAGATAACCCTCCATCCTTTGCAGGTTGCAAAGCGATTAGAGAAGTTCAAACCAACAATCTTCACCCAAATGAGTATGCTTGCCATTAAACATGGAGCTATTAGCCTTGGTCAGGGCTGTCCAAACTTTGATGGTCCAGAGTTTGTGAAGGAAGCAGCAATTCAGGCAATCAGGGATGGGAAAAATCAGTATCCAAGGGGTTTTGGAGTTCCAGAGCTCAATGTTGCCATTGCTGAGAGATTCATGAAAGATACCGGACTAATTGTAGACCCTGATAAGGAAGTTACTGTTACAACTGGATGCACAGAAGCAATTGCTGCAACTGTATTAGGATTAATAAATCCAGGTGATGAGGTTATTCTGTTTGCTCCTTTTTATGATTCTTATAATGCCACTTTATCGATGGCTGGTGCGAATATAAAAAGCATTACGCTGCACCCTCCAGATTTTGCTGTCCCAATTGAAGAGTTGAAGTCCATCATCTCAAAGAATACTCGTGCGGTTCTTATAAATACCCCTCACAATCCTACCGGAAAGATGTTCACTCGAGAGGAACTCAGTACTATTGCTTCTGTCTGCATTAAGAATGATGTTCTGGTTTTCTCTGATGAAGTTTATGATAAGTTGGCATTTGATATGGAACACATTTCAATTGCTTCTTTGCCTGGAATGTTCGAGCGGACAGTGACAATGAACTCgttagcaaaatcattctcccTAACTGGATGGAAGGTTGGATGGGCCATAGCACCGGTTCACTTAACATGGGGAGTGCGACAGGCGCACACTTTTATAACTTTCTCTACTTCAAATCCTTTGCAGTGCGGTGCTACAGCAGCTCTCAGAGCACCAGATTCTTACTTTGTCGAGCTAAAGAAGGATTATATAGCAAAGAGAGCTATTTTGGTGGAAGGGTTGAAAAGTGTTGGATTCAAGGTGTTCCCATCCAATGGAACATTCTTTGTGCTAGCAGACCACACCCCTTTTGGACTAGAAAATGATGTTGCATTTTGCGAATATCTAATTAAGGAGATTGGAGTGGCGGCGATACCTTCCAGTGTATTCTACTTGAATCCAGAAGAGGGGAAGAATCTAGTCAGATTTACTTTCTCCAAGGATGAGGAAACTCTTATGGCCGCAGTTCAGAGGATGAAGGAAAGACTTAGAAAATAA 1194 0.4162 MSTTAETEITLHPLQVAKRLEKFKPTIFTQMSMLAIKHGAISLGQGCPNFDGPEFVKEAAIQAIRDGKNQYPRGFGVPELNVAIAERFMKDTGLIVDPDKEVTVTTGCTEAIAATVLGLINPGDEVILFAPFYDSYNATLSMAGANIKSITLHPPDFAVPIEELKSIISKNTRAVLINTPHNPTGKMFTREELSTIASVCIKNDVLVFSDEVYDKLAFDMEHISIASLPGMFERTVTMNSLAKSFSLTGWKVGWAIAPVHLTWGVRQAHTFITFSTSNPLQCGATAALRAPDSYFVELKKDYIAKRAILVEGLKSVGFKVFPSNGTFFVLADHTPFGLENDVAFCEYLIKEIGVAAIPSSVFYLNPEEGKNLVRFTFSKDEETLMAAVQRMKERLRK 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01992 397 Gene3D - 53 291 IPR015421 GO:0003824
Tsu03g01992 397 PANTHER FI04487P 16 396 - -
Tsu03g01992 397 Gene3D Aspartate Aminotransferase, domain 1 30 391 IPR015422 GO:0003824
Tsu03g01992 397 PANTHER FI04487P 16 396 - -
Tsu03g01992 397 CDD AAT_like 41 393 - -
Tsu03g01992 397 SUPERFAMILY PLP-dependent transferases 16 396 IPR015424 -
Tsu03g01992 397 Pfam Aminotransferase class I and II 41 390 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01992 Tsu-Chr3 20649833 20651635 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01992 K23977 - gmx:100818968 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01992 03 20649833 20651635 Tsu03g01992 03 20649833 20651635 ECH