Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01991 ATGTCCACTGACAATCACATTCAAACCCATCCTTTACAGGTTGCAAAGCGGTTAGAGAActtcaaacaaacaatcttCACCAAAATGAGTATGCTTGCCGTTAAACATGGAGCTATTAACCTTGGTCAGGGCTTTCCAAACTTTGATGGTCCAGAGTTTGTGAAGGAAGCAGCAATTCAGGCAATCAGGGATGGGAATAATCAGTATGCAAGGGGTTATGGTGTTCCAGACCTCAACATTGCCATTGCTGAGAGGTTCAAGAAAGATACCGGATTAATTGTAGACCCTGAAGAGGAAATTACTGTTACAGCTGGTTGCACCGAAGCAATTGCTGCAACTGTATTAGGACTAATAAATCCCGGTGATGAGGTTATTCTGTTTGCTCCTTTTTATGATTCTTATAATGCCACTTTATCGATGGCTGGCGCGAATATAAAAAGCATTACTCTGCGCCCTCCTGATTTTGCTGTCCCAATTGAAGACTTGAAGTCCAACATCTCAAAGAATACTCGTGCAATTCTTATAAACACCCCGCACAATCCTACCGGAAAAATATTCACTCGAGAGGAGCTTAATACCATTGCATCTCTTTGCATTGAAAATGATGTTCTGGTTTTCACTGATGAAGTTTATCATAAGTTGGCATTCGATATGGAACACATTTCAATTGCTTCTCTACCTGGAATGTTTGACCGGACGGTAACAATGAACTCGTTAGGGAAGTCATTCTCCTTAACAGGGTGGAAGTGCGGTGCTGTAGCAGCACTTAGAGCACCGGATTCATACTTTGTGGAGCTAAAGAGAGATTATATAACAAAGAGAGCAATTTTGGTGGAAGGGTTGAAGAGTGTTGGATTCAAAGTGTTTCCATCCAATGGAACATTCTTTGTGCTTGCAGACCACACCCCTTTCGGACTAGAAAACGATGTTGCATTTTGTGAATATCTAATCAAGGAGATTGGGGTGGCGGCAATACCTTCGAGTGTATTTTACTTAAATCCAGAAGAGGGAAAGAATCTAGTCAGATTTACTTTCTGCAAGGATGAGGAAACTCTTAAGGCAGCTATTGAGAGGATGAAGaagcttaaaaaataa 1095 0.4046 MSTDNHIQTHPLQVAKRLENFKQTIFTKMSMLAVKHGAINLGQGFPNFDGPEFVKEAAIQAIRDGNNQYARGYGVPDLNIAIAERFKKDTGLIVDPEEEITVTAGCTEAIAATVLGLINPGDEVILFAPFYDSYNATLSMAGANIKSITLRPPDFAVPIEDLKSNISKNTRAILINTPHNPTGKIFTREELNTIASLCIENDVLVFTDEVYHKLAFDMEHISIASLPGMFDRTVTMNSLGKSFSLTGWKCGAVAALRAPDSYFVELKRDYITKRAILVEGLKSVGFKVFPSNGTFFVLADHTPFGLENDVAFCEYLIKEIGVAAIPSSVFYLNPEEGKNLVRFTFCKDEETLKAAIERMKKLKK 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01991 364 PANTHER FI04487P 14 251 - -
Tsu03g01991 364 PANTHER FI04487P 252 363 - -
Tsu03g01991 364 SUPERFAMILY PLP-dependent transferases 14 362 IPR015424 -
Tsu03g01991 364 Gene3D Aspartate Aminotransferase, domain 1 255 364 IPR015422 GO:0003824
Tsu03g01991 364 CDD AAT_like 39 361 - -
Tsu03g01991 364 PANTHER FI04487P 14 251 - -
Tsu03g01991 364 PANTHER FI04487P 252 363 - -
Tsu03g01991 364 Pfam Aminotransferase class I and II 39 271 IPR004839 GO:0009058|GO:0030170
Tsu03g01991 364 Gene3D - 15 254 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01991 Tsu-Chr3 20637064 20648766 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01991 K23977 - gmx:100818968 624.394