Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01976 ATGGGTTTCTCAAAGGAACAACTGCTTCAGAAGTTACAGGAGCTTAAGATTGAATTTTCCAAGCATGACCATCCAGTTGTTTTGACTGTTGAGGCTCAGGCAAAGTATGTTGATGTTGGAAAGTTGGGTGGTGGActtagtaaaaatttatttttgaagGACAAGAAAAACAGGTTTTACATTGTTTCTGCTTTAGCTGATACCAAAGTAGACTTGAAAGCAGTGTTATCTCAGCGGCTTGGTTTGGGAAAAGGTGGTCTCAGAATGGCACCTGAAGAGGCTTTAGGTGAATTACTTCAGGTACCCTTGGGGTGTGTCACACCATTTGCAGTAGTGAATGAATCAGCACGAGATGTTTCGCTGCTATTAGATCAAGGATTCAAGAAAGAGAAGCATTGTTTCTTTCATCCATTGTCAAATGACGCCTCCATATCTCTAAATGTAAGTGGTCTTGACAAATTTCTTACATCAATAGGAAGAGATCCCGCGTATGTTGATTTGGAGGCCAATCCTGCAGTGGGAAAAGATCAACCCCCTGATCTAGCCGCGCTTGTACCATCCAGTGCAATAACCTTGCCTGATCAACCAGGAAAGCAATCATCTGCAGAAGTTCCTAAGGAAGGAAACCTTGTTTCTGTGGATAATAACTCCAAGACCGTTCCAGCCAAAGTTGTCAAGCAATCAGTTGTTGTGAGCAATTCAAAGGGAACACCGGAAAAAAATGTTCAGTCATCAAAATCCTTTGCAGATGTTGGGAAATTAGTTGAAGAGATATTgaataaaacatcaaaattattGGTTTCAGAGATCAATGAAGAAACTATAAAGACACACGGAGAGCAGCTGGGTACTACGTTATCTGACAAATTACACAAAAACCTTGGCTCAGATTTTAAAAATCTCGCTATGATATTTAAGAACACTGCATATACAGAAGGATTCCATGCCGGTATTCGCCAGCAGCCCAAGTGGTAA 975 0.399 MGFSKEQLLQKLQELKIEFSKHDHPVVLTVEAQAKYVDVGKLGGGLSKNLFLKDKKNRFYIVSALADTKVDLKAVLSQRLGLGKGGLRMAPEEALGELLQVPLGCVTPFAVVNESARDVSLLLDQGFKKEKHCFFHPLSNDASISLNVSGLDKFLTSIGRDPAYVDLEANPAVGKDQPPDLAALVPSSAITLPDQPGKQSSAEVPKEGNLVSVDNNSKTVPAKVVKQSVVVSNSKGTPEKNVQSSKSFADVGKLVEEILNKTSKLLVSEINEETIKTHGEQLGTTLSDKLHKNLGSDFKNLAMIFKNTAYTEGFHAGIRQQPKW 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01976 324 MobiDBLite consensus disorder prediction 192 215 - -
Tsu03g01976 324 Gene3D - 2 174 IPR036754 GO:0002161
Tsu03g01976 324 CDD PrdX_deacylase 5 165 - -
Tsu03g01976 324 Pfam Aminoacyl-tRNA editing domain 24 154 IPR007214 GO:0002161
Tsu03g01976 324 PANTHER YBAK DOMAIN-CONTAINING PROTEIN 1 323 IPR040285 -
Tsu03g01976 324 SUPERFAMILY YbaK/ProRS associated domain 3 167 IPR036754 GO:0002161
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01976 Tsu-Chr3 20533850 20537395 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01976 - - ahf:112764287 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01976 03 20533850 20537395 Tsu03g01976 03 20533850 20537395 ECH