Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01972 ATGGCAAAAGTCTTCAACCTAAGTTCTGTTACCAGAATAGCTCTGATTTTGTTGCTATGTTTCAATTCTCTTATTAATCTCCCTCAAACTAAGGCTCTTTGGTTAACTTTACCCAGTCATGGAACTAAGTGCGTGTCACAGGAAATCCAAACACATGTTGTCGTTTTAGCTGATTACTATGTTGTTGCTGATAATATCAAGGGTCAACCACTTCCTACTATTTCTGCCAAGGTGACATCTCCATATGGAAATAATCTTCACCACAATGAAAATGTTACCCAAGGTCAATTTGCATTTACAACTACCGAGAGTGGGAACTACGTGGCATGCTTTTGGATGGATAGTAAAAATCTACAAGGTACTTCAATCAGCCTTGATTGGAAAACTGGAATCTCTGCCAAAGATTGGGACTCCgttgcaaaaaaagaaaagatagagGGAGTTGAGCTTGAGCTAAGGAAACTTGAAGGAGCCGTGGAAGCCATCCATGAAAATCTGTTATATTTAAAGACTAGGGAAGCAGAGATGAGAGAAGTTAGTGAAGTAACAAATGGCAGAGTTGCTTGGTTCAGTATAATGTCTCTTGGTGTCTGCCTTTCGGTTTCGGCGTTGCAGCTGTTGTATCTAAGACGCTACTTTCGGATCAAGAAGCTCATATAG 660 0.3909 MAKVFNLSSVTRIALILLLCFNSLINLPQTKALWLTLPSHGTKCVSQEIQTHVVVLADYYVVADNIKGQPLPTISAKVTSPYGNNLHHNENVTQGQFAFTTTESGNYVACFWMDSKNLQGTSISLDWKTGISAKDWDSVAKKEKIEGVELELRKLEGAVEAIHENLLYLKTREAEMREVSEVTNGRVAWFSIMSLGVCLSVSALQLLYLRRYFRIKKLI 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01972 219 PANTHER EMP24/GP25L/P24 FAMILY PROTEIN 8 219 - -
Tsu03g01972 219 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 8 219 IPR015720 -
Tsu03g01972 219 SMART EMP24_GP25L_2 32 214 IPR009038 -
Tsu03g01972 219 ProSiteProfiles GOLD domain profile. 42 154 IPR009038 -
Tsu03g01972 219 Coils Coil 145 165 - -
Tsu03g01972 219 Pfam emp24/gp25L/p24 family/GOLD 32 214 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01972 Tsu-Chr3 20457803 20460932 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01972 K20352 - gmx:100500676 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01972 03 20457803 20460932 Tsu03g01972 03 20457803 20460932 ECH