Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01961 ATGGCAGAAGAAGATatacagaagaagaagaatgacgATGTCGATGATGTTCAATCTCAGATTCAAACTGCCATGCGCTCTCGCGTCCCTCACTTCAAGCAACAAGCCgaTTCTTTGACATTTGAAGGTGTTCGTAGATTGCTCGAGAAAGACTTGGGTGTTGAACAGTTTTCTTTGGATTCTCACAAAGGATTTATTAAAGACTGTTTGAAAGAGTGCCTACAAGAGGGTGGTGATGATGATGCCCCAAAGGTGTCGGGCGAGGAAGGGGAAAAAGGTGAAAGTACCCAAGAGACAGAAGGACAAAAGGAAGAACTTCAATCTAAAGATGAAAAGGATCTCCCTGAAGATAAGGAGAAAACGGAAGATTCTCCAGTATTAGGTCTGCTTAAAGAACAAAAGGAAGTTAAAAAAGAAACCAAGAAAGAAGACGGCGATGGGAAAAAAATAGTCCCAAGTGAGAACCTAATTAAGAAAGCTATTAGAAAAAGATCTTCATACCTCAAGGCTAATGCAGAAAAACTCACTTATGGTAGTCTTCGCCGACTATTGGAGGAAGATCTTAAACTTGATAAATTTACCCTGGATCCTTTTAAGAAGTTTATAAATAAAGAACTTGATGAGGTATTAACATCTTCTGAAGTTGTGGAACCTGCAAAAAGTCCTAAGAAAATTGTTAAGAAGAAACCTGATACCAAAGTAACTAAAAAGGTTAGTACTGAAGAGACCTCTGATACTTCTGATGAAGTGAGTGAAGAGGAAGAGaatgaggaagatgaagttAAACCTAGAAAAAAAAGTGTTCCAAAAGGCAAGATGCAGACTCCTGTTGGACCCAAAAAGCGTAAAGGAGATGAGACCAATCTACCCAGCAAGAAAAGGGTCAAGCCCGATAAAGCAGCTGCAGAAAACAATAGTGATGCAGAAGATGATGGAAAAAACTCTGAAGATGATCAGTCCCATTCATCAGCAGAGAATACTACTACTAAGAAGAAACAAGTTTCAACTCCTGTGTACAGTAAACGTGTGGAGCACTTGAAATCTGTTATTAAAGCATGTGGGATGAGCATTCCTCCcgttatttataaaaaagtcAAGCAGGTGCCTGAAAACAAACGGGAAGGACAACTAATTAAAGAATTGGAGGAAATACTATCTAGAGAAGGCTTGTCTCCAAACCCATCTGAAAaggAAATCAAAGAAGTGAATAGGAAGAAGGCAAGAGCCAAGGAACTTGAGGGTATTGATATGAGTAATATTGTGTCAAGTACACGTAGAAGGGCATCAATTAGTTTTGCGGCTCCTCCACCACCAAAGCCTAAGATTCCGGTGGAAACTAGTGGCAAAGATTCCAAAGGTAGTGATAACGACAACGATGATGAAGGCAATGATaatgaagaggatgaagaagatgaagaagaggaggaggagAGTAGTGATGATGATGGAAGTGAGAGTGAAGAATTTAATGAAGATGAAGAGGACAGTGATTGA 1494 0.3708 MAEEDIQKKKNDDVDDVQSQIQTAMRSRVPHFKQQADSLTFEGVRRLLEKDLGVEQFSLDSHKGFIKDCLKECLQEGGDDDAPKVSGEEGEKGESTQETEGQKEELQSKDEKDLPEDKEKTEDSPVLGLLKEQKEVKKETKKEDGDGKKIVPSENLIKKAIRKRSSYLKANAEKLTYGSLRRLLEEDLKLDKFTLDPFKKFINKELDEVLTSSEVVEPAKSPKKIVKKKPDTKVTKKVSTEETSDTSDEVSEEEENEEDEVKPRKKSVPKGKMQTPVGPKKRKGDETNLPSKKRVKPDKAAAENNSDAEDDGKNSEDDQSHSSAENTTTKKKQVSTPVYSKRVEHLKSVIKACGMSIPPVIYKKVKQVPENKREGQLIKELEEILSREGLSPNPSEKEIKEVNRKKARAKELEGIDMSNIVSSTRRRASISFAAPPPPKPKIPVETSGKDSKGSDNDNDDEGNDNEEDEEDEEEEEESSDDDGSESEEFNEDEEDSD 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01961 497 MobiDBLite consensus disorder prediction 211 339 - -
Tsu03g01961 497 MobiDBLite consensus disorder prediction 76 150 - -
Tsu03g01961 497 SMART CHZ_2 406 441 IPR019098 -
Tsu03g01961 497 MobiDBLite consensus disorder prediction 1 20 - -
Tsu03g01961 497 MobiDBLite consensus disorder prediction 393 413 - -
Tsu03g01961 497 PANTHER HIRA-INTERACTING PROTEIN 3 1 496 IPR037647 -
Tsu03g01961 497 MobiDBLite consensus disorder prediction 1 16 - -
Tsu03g01961 497 MobiDBLite consensus disorder prediction 459 497 - -
Tsu03g01961 497 MobiDBLite consensus disorder prediction 278 325 - -
Tsu03g01961 497 MobiDBLite consensus disorder prediction 389 497 - -
Tsu03g01961 497 Pfam Histone chaperone domain CHZ 408 436 IPR019098 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01961 2 88 EF-hand Containing Proteins AT1G44780 38.710 1.52e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01961 - - gmx:100784738 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01961 03 20299394 20304599 Tsu03g01961 03 20299394 20304599 ECH