Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01954 ATGGAAGAAACCTTTGTTTTCCAGTGGACTGTAATCAGATCTCTCTTATCTATCCTTCAATGGTGGACTTTCAATGTCACCgttatcatcatcaacaaatgGATCTTCCAGAAATTAGATTTCAAGTTTCCCCTATCAGTATCCTGTGTCCACTTTATCATCTCGGCCATTGGAGCATATGTAGTAATTAAGGTGCTGAAGATTAAACCACTGATAACTGTTGACCCTGAAGATCGCTTGAAAAGAATCTTTCCAATGTCATTGGTGTTCTGTATTAACATAGTGCTGGGGAATGTGAGCCTACGATACATTCCAGTTTCATTTATGCAGACAATAAAGTCATTCACACCTGCAACCACAGTTGTTTTGCAATGGCTAGTGTGGAGGAAGCATTTTGACTGGCGTATTTGGGCCTCTCTTATACCCATTGTTGGAGGGATTCTTCTAACATCTGTTACAGAGATGAGCTTTAATATGTTCGGATTTTGTGCTGCCTTATTCGGCTGTTTGGCTACATCTACAAAGACTATCCTTGCAGAATCTCTTCTCCACGGATACAAATTCGACAGCATAAACACGGTTTATTACATGGCACCTTATGCGACCATGATATTGGTGCTTCCTGCCATGGTACTTGAAGGCAATGGAGTTCTTGAATGGCTAAATACTCATCCATATCCTTGGGCGGCCCTCATCATTATTTTTAGTTCTGGGGTGTTGGCTTTCTGTCTTAACTTCTCCATTTTTTATGTGATCCACTCCACCACTGCTGTAACATTTAACGTCGCTGGGAACCTTAAGGTTGCAGTTGCTGTCCTTGTTTCTTGGCTGATATTTAGGAACccaatttcatatttaaatgCTGTTGGGTGTGCCATCACTCTTGTGGGTTGTACATTCTATGGTTATGTTAGGCACTTGCTCTCCCAACAGCCACCAGTTCCGGGAACTCCTCGAACTCCTCGAACACCAAGAACCCCTCGGAGTAAAATGGAGTCGCTTCCACTTGTAAATGATAAACTAGAAAATAAGGTCTAA 1038 0.4075 MEETFVFQWTVIRSLLSILQWWTFNVTVIIINKWIFQKLDFKFPLSVSCVHFIISAIGAYVVIKVLKIKPLITVDPEDRLKRIFPMSLVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKHFDWRIWASLIPIVGGILLTSVTEMSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPYATMILVLPAMVLEGNGVLEWLNTHPYPWAALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYLNAVGCAITLVGCTFYGYVRHLLSQQPPVPGTPRTPRTPRTPRSKMESLPLVNDKLENKV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01954 345 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
Tsu03g01954 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 300 - -
Tsu03g01954 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 72 152 - -
Tsu03g01954 345 Gene3D - 49 158 - -
Tsu03g01954 345 PANTHER GDP-MANNOSE TRANSPORTER GONST5 4 327 - -
Tsu03g01954 345 MobiDBLite consensus disorder prediction 312 345 - -
Tsu03g01954 345 PANTHER SOLUTE CARRIER FAMILY 35 4 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01954 Tsu-Chr3 20210579 20216712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01954 1 345 Organic Solute Cotransporters AT1G77610 85.838 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01954 K15285 - gmx:100778350 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01954 03 20210579 20216712 Tsu03g01954 03 20210579 20216712 ECH