Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01948 ATGGACTCAACCACTTTCTCCAATTTCTTACCCTCTTCTCATTCAATTCCTCTCTCACAACAACCTTATCATCATCGTCTTCAATTCTCTCCTCATCAATTTCTGaaactTAAGCGCTTTGGTTTGGTTAAGAATCGCTTAATTGCTCGTTCTACTTCTTCTGGCTCTGATCAATCTGatgctggtggtggtggtggtggttctcCTAATGGAATTCAGTTAACACCCAATAAACTTTTCTTGCAGGAGGCTATTGGGGCTGAATATGGGGAAGGCTTTGAAACTTTTAGGGCAGATGGACCATTAAAAGTTGATGTGGACTATTTGAATGATAAGTTACAAGATGGTATTCTTCAACGCATACGTTATGCTATGAAGCCAGATGAAGCTTATGGTCTTATCTTCTCTTGGGACAATGTGGTGGCTGATACTCGATCTCTGAAGAGGAAGGCATGGAACCAGCTGGCCTCTGAAGAAGGAAAGGATATTCCTGAAGATGGTGATATTGAAAAGTTAATGCTTAATGCAGGTGCTGATTATGTATTAAATAAGCATTTTCTCTCCGATAAGGAAGAAAGTGAGCTGGATAGACTGAAGTTGAGGTTTTCTCAAATATATTATGATAATCTTCTGAAACTTGAAAGACCAATGGAGGGCGTGAAAGATTGGTTGGAAGCGGTTTATACAGCTCGCATCCCCTGTGCTGTTGTTTCAAGTCTTGATAGAAAACATATGGTTGAAGCTTTGCAACAAATGGGGCTCCATAAGTACTTTCAGGCAATTGTGACAGAGGAGGATGGAATGGAGTCAATAGCGCATAGATTCCTTTCTGCTGCCGTCAAGCTTGATCGGAAACCTTCCAAGTGTGTGGTTTTTGAAGATGATCCTCGAGGAGTAACTGCTGCGCACAATTGCACAATGATGGCTGTAGCATTGATTGGAGCTTATCGCGCGTATGATTTAGAGCAAGCTGATCTTGCTGTTGCTAACTTCAGTGAACTTTCTGTAATCAACTTGAGGAGACTATTTGCCAACAAGGGCTCTACATTTATGGATCTGCAGAAGCAGATTATAGATAAAACTCCTCCCAAAAGGAGACTTGGAATAGACACCATTTTCTAG 1122 0.3984 MDSTTFSNFLPSSHSIPLSQQPYHHRLQFSPHQFLKLKRFGLVKNRLIARSTSSGSDQSDAGGGGGGSPNGIQLTPNKLFLQEAIGAEYGEGFETFRADGPLKVDVDYLNDKLQDGILQRIRYAMKPDEAYGLIFSWDNVVADTRSLKRKAWNQLASEEGKDIPEDGDIEKLMLNAGADYVLNKHFLSDKEESELDRLKLRFSQIYYDNLLKLERPMEGVKDWLEAVYTARIPCAVVSSLDRKHMVEALQQMGLHKYFQAIVTEEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGVTAAHNCTMMAVALIGAYRAYDLEQADLAVANFSELSVINLRRLFANKGSTFMDLQKQIIDKTPPKRRLGIDTIF 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01948 373 CDD HAD_BPGM-like 132 314 - -
Tsu03g01948 373 SUPERFAMILY HAD-like 106 334 IPR036412 -
Tsu03g01948 373 Gene3D Putative phosphatase; domain 2 143 216 IPR023198 -
Tsu03g01948 373 Pfam Haloacid dehalogenase-like hydrolase 133 311 IPR041492 -
Tsu03g01948 373 Gene3D - 133 329 IPR023214 -
Tsu03g01948 373 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 373 - -
Tsu03g01948 373 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 1 373 - -
Tsu03g01948 373 MobiDBLite consensus disorder prediction 51 73 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01948 - - gmx:100817685 567.385