Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01942 atggaAACCAAAGAAGATTATACACAAGATGGCACTGTTGATTTCCATGGCAAGCCTGCTGTTCCATCCAAAACTGGCAAATGGAAGGCTTGCGCTTTTCTTGTTGgGTATGAAGCATTTGAAAGGATGGCCTTCTATGGAGTTGCATCAAACTTGGTGAATTACCTTACAACACAACTTCATGAAGATACTGTTTCATCAGTCAGGAATGTGAATAATTGGTCAGGATCTGTTTGGATAACACCAATTCTTGGTGCTTATATAGCTGATTCACACTTGGGTCGCTTCTGGACTTTCACCCTCTCATCTCTCATTTATGTTTTGGGAATGACACTTCTTACTATAGCTGTATCACTCAAGAGCTTGAAACCAACATGCACAAATGGTTTGTGCAACAAAGCCTCAACATCACAAATTGCATTTTTCTATACAGCACTTTACACAATGGCAATAGGTGCAGGTGGAACAAAACCAAATATATCAACATTTGGTGCTGACCAATTTGATGATTTTAATCCTCATGAGAAAGAGTTAAAGGCTTCTTTCTTTAATTGGTGGATGTTTACATCATTTTTAGGTGCCTTAATTGCAACATTAGGCCTTGTATACATTCAAGAGAATTTAGGTTGGGGACTTGGATATGGTATTCCTACTGCTGGTTTATTATTGTCACTGGTGATTTTTTATATAGGGACACCAATTTATAGACATAAAGTTAGGACTTCTAAAAGTCCTGCTAAGGATATAGTTCGTGTCCTTATTGCTGCTTTCAAGAATAGAAAACTTCAACTTCCAAGTAACCCTTCAGATTTACATGAGTTTCAGATGGAACATTGTGTTATTAGGGGGAAAAGACATGTCTATCACACTCCAACTTTGAGGTTTTTGGACAAAGCTGCTATCAAAGAAGATCCTACAACTGATTCCAAAAGAGTACCAATGACAGTAAACCAAGTAGAAGGAGCAAAGCTAATCTTTGGTATGCTCCTAATATGGCTAGTGACACTGATTCCAAGCACCATTTGGGCACAAATCAACACTCTTTTTGTCAAACAAGGCACAACCTTAGACAGAAACCTTGGTTCTGATTTCAAAATCCCTGCAGCATCTCTAGGTAGCTTTGTAACACTCTCCATGTTGCTCTCAGTGCCAATGTATGACCGGCTTTTCGTACCATTCATGCGACAGAAAACCGGCCACCCTAGAGGAATCACATTGCTTCAAAGACTTGGAATTGGATTTTCAATCCAAATCATAGCCATTGCAATTGCTTATGCAGTTGAAGTTAGAAGAATGCATGTcataaaacaaaaccaaatttcTGGTCCTAAAGATATTGTCCCTATGAGTATATTTTGGTTGTTACCACAATATGTTCTTATTGGTATAGCTGATGTATTCAATGCCATTGGATTGTTGGAATTCTTCTATGATCAATCTCCTGAAGATATGCAAAGTCTTGGAACGACTTTCTTCACTAGTGGAATTGGTGTTGGAAATTTCTTGAATAGCTTTTTGGTAACAATCACTGATAAGATAACAGGAAGAGGAGATAGAAAAAGTTGGATAGCTGATAACTTGAATGATTCTCACTTGGATTACTATTATGGGTTTCTTTTGATCATGTCAAGTGTTAATTTGTTAGTGTTTCTTTGGGTTTCAAGTAGATACATTTACAAAAAAGAATCATTAAGGGTTAAAGAAGCACTTTGTATTCAAATGGAAGAAAACCCAACTTTGGATGCATCTCTTGGTTTACAAGTATGA 1767 0.3684 METKEDYTQDGTVDFHGKPAVPSKTGKWKACAFLVGYEAFERMAFYGVASNLVNYLTTQLHEDTVSSVRNVNNWSGSVWITPILGAYIADSHLGRFWTFTLSSLIYVLGMTLLTIAVSLKSLKPTCTNGLCNKASTSQIAFFYTALYTMAIGAGGTKPNISTFGADQFDDFNPHEKELKASFFNWWMFTSFLGALIATLGLVYIQENLGWGLGYGIPTAGLLLSLVIFYIGTPIYRHKVRTSKSPAKDIVRVLIAAFKNRKLQLPSNPSDLHEFQMEHCVIRGKRHVYHTPTLRFLDKAAIKEDPTTDSKRVPMTVNQVEGAKLIFGMLLIWLVTLIPSTIWAQINTLFVKQGTTLDRNLGSDFKIPAASLGSFVTLSMLLSVPMYDRLFVPFMRQKTGHPRGITLLQRLGIGFSIQIIAIAIAYAVEVRRMHVIKQNQISGPKDIVPMSIFWLLPQYVLIGIADVFNAIGLLEFFYDQSPEDMQSLGTTFFTSGIGVGNFLNSFLVTITDKITGRGDRKSWIADNLNDSHLDYYYGFLLIMSSVNLLVFLWVSSRYIYKKESLRVKEALCIQMEENPTLDASLGLQV 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01942 588 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 12 567 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu03g01942 588 SUPERFAMILY MFS general substrate transporter 18 554 IPR036259 -
Tsu03g01942 588 Gene3D MFS general substrate transporter like domains 1 566 IPR036259 -
Tsu03g01942 588 CDD MFS_NPF5 28 559 IPR044739 GO:0042937|GO:0042938|GO:0071916
Tsu03g01942 588 Pfam POT family 96 523 IPR000109 GO:0016020|GO:0022857|GO:0055085
Tsu03g01942 588 PANTHER PROTEIN NRT1/ PTR FAMILY 5.1 12 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01942 Tsu-Chr3 20125967 20130935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01942 1 583 Organic Solute Cotransporters AT2G40460 71.624 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01942 - - gmx:100815188 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01942 03 20125967 20130935 Tsu03g01942 03 20125967 20130935 ECH