Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01920 ATGGCAAAATCATATGAATCCGCACTTAGAAATCATATATCGCGGATTGTATCATCTATGAAACCCCATAAACCCAAAACAACTCAACCCGTATCGCCGAACCGGGTCACCACTCCACGAACACCGAAACTAGACGCCACTGTTAAGATTGAATCGCCGAAGAAGTTGGAACCTGTGGAAACTCGAAAACCCCTTTCCAAGGTGGTCGCTGATTGCACTAAACGCTGGTTTCAGGAAACGCTTAGGGAGGCCAAAGGTGGAGATAGCGCAATGCAACTTCTTGTTGGTCAAATGTATTACTCTGGCTATGGTGTTCCTAAAGATCCTCaaaagGGACATACTTGGATTAGTAAAGCATCAAGAAGTCGAAATTCAGTTTGGCAAGTAAGCGAAAAACAACCAGGTTACAAAGCAAGTGATTCGGATTCATCTGAACAGGAGAACAAATCTACTCCTTAA 459 0.4336 MAKSYESALRNHISRIVSSMKPHKPKTTQPVSPNRVTTPRTPKLDATVKIESPKKLEPVETRKPLSKVVADCTKRWFQETLREAKGGDSAMQLLVGQMYYSGYGVPKDPQKGHTWISKASRSRNSVWQVSEKQPGYKASDSDSSEQENKSTP 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01920 152 Gene3D Tetratricopeptide repeat domain 73 137 IPR011990 GO:0005515
Tsu03g01920 152 PANTHER TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATED 1 151 - -
Tsu03g01920 152 MobiDBLite consensus disorder prediction 1 46 - -
Tsu03g01920 152 MobiDBLite consensus disorder prediction 21 41 - -
Tsu03g01920 152 SMART sel1 89 124 IPR006597 -
Tsu03g01920 152 MobiDBLite consensus disorder prediction 106 152 - -
Tsu03g01920 152 PANTHER EXPRESSED PROTEIN 1 151 - -
Tsu03g01920 152 SUPERFAMILY HCP-like 84 122 - -
Tsu03g01920 152 MobiDBLite consensus disorder prediction 115 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01920 Tsu-Chr3 19895718 19896908 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01920 - - gmx:100811436 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01920 03 19895718 19896908 Tsu03g01920 03 19895718 19896908 ECH